[Fri Aug 26 17:06:20 2016] >Input file: TMA1K2Z3M1D.pdb >TM segments: 167-193 MAIDEN score = -0.2793 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W177 -L182 0.819794214144086 P179 -G185 0.585693054607377 L174 -S186 0.440847863315024 R176 -L182 0.402750074773605 W177 -G185 0.371609416556915 P179 -S187 0.363732465230824 G185 -E193 0.343687261041178 W177 -G183 0.279015237325617 L178 -S187 0.256235523136467 H175 -G183 0.241508855856447 G167 -H175 0.236126305290496 T173 -L182 0.231656115673722 H175 -L182 0.225921519352984 G183 -N192 0.196078499031666 W177 -R188 0.179657184964523 R176 -R188 0.173721396460128 A169 -R176 0.171272306107626 L172 -S186 0.168155112716445 W177 -S186 0.163048381394393 T173 -D181 0.158576977507024 R188 -E193 0.158001184887166 P179 -R188 0.154771723084109 H180 -S187 0.148417135168347 H175 -D181 0.146388454853625 R176 -A184 0.144859537089557 T173 -G183 0.14372784451519 L172 -P179 0.131710844116097 H180 -G185 0.13132613740452 D181 -N192 0.125228411809354 A170 -S187 0.124891682016846 A170 -S186 0.118421655314657 A171 -P179 0.11487994451109 L182 -S187 0.113647664740201 L178 -G185 0.109873054324297 V168 -H175 0.106775545184436 A184 -G189 0.106350513962948 P179 -S186 0.0959850586215465 L174 -S187 0.0866441025969542 T173 -S187 0.0845558389013929 G167 -L172 0.0833306249580241 L174 -G185 0.0819683759928217 A170 -P179 0.0784179374250726 L174 -R188 0.069312831132807 H175 -S187 0.0672456119748471 A170 -G185 0.0664880313254872 A171 -R188 0.0646488315807269 A171 -S186 0.0621681842303374 A170 -R188 0.0617872487232184 A184 -L191 0.0594541465606571 T173 -G185 0.0568961436083302 L174 -G183 0.0544124554890952 G183 -E193 0.0514718535785944 L174 -A184 0.0511425573605724 A169 -L178 0.0454360603215243 L178 -G189 0.041493859942066 S186 -L191 0.0390826736908396 G167 -T173 0.0388262166737581 V168 -T173 0.0388217596247857 L172 -H180 0.0360164530907918 G185 -N192 0.0354222822549062 V168 -R176 0.0338559742101641 L174 -G189 0.0267969271241837 L174 -L182 0.0238201708179373 H180 -R188 0.0235969345808995 G185 -L191 0.0214643475597189 G185 -L190 0.0194843313765785 D181 -R188 0.0141549804319787 L172 -G185 0.00577526693450281 T173 -P179 0.00137203894669113 T173 -A184 0.000210629787806393 S186 -E193 -0.00617362680124156 A169 -W177 -0.0106192108451786 G183 -R188 -0.0138751904555998 A171 -R176 -0.0141414745992833 H175 -H180 -0.0180514635911395 R176 -G185 -0.0185718995538133 T173 -R188 -0.0320032762121054 A170 -L178 -0.0364515806502004 T173 -H180 -0.0375582480842809 W177 -A184 -0.0482537740939533 R176 -S187 -0.0583218716750447 A171 -G185 -0.0604600386501985 S187 -E193 -0.0675414314036753 D181 -S187 -0.0851706071374194 R176 -S186 -0.0855050634358706 L172 -D181 -0.0863979818165269 L178 -N192 -0.0907216847934409 H175 -R188 -0.0919708135428587 W177 -E193 -0.0975809295248098 A184 -L190 -0.11696833094888 A184 -N192 -0.123142166320684 A169 -H175 -0.125594039906264 P179 -A184 -0.12727237039246 L178 -G183 -0.127988063070617 L182 -R188 -0.128711610223398 A171 -H180 -0.128734738421541 H175 -A184 -0.132210305528583 A171 -D181 -0.13886159082409 R176 -G183 -0.14879661835553 V168 -W177 -0.151378175099095 R176 -D181 -0.153629722107786 L174 -P179 -0.1593168849314 L178 -S186 -0.159805030920891 L174 -E193 -0.160201828376026 L178 -E193 -0.162449453846686 L172 -L182 -0.164101599411847 G167 -L174 -0.165295515948662 L174 -H180 -0.165751717394932 A171 -L178 -0.165907002883623 D181 -S186 -0.172449555526839 A171 -W177 -0.175220711239364 H175 -S186 -0.182376182002387 W177 -S187 -0.191648087140315 L178 -A184 -0.206900383526021 S186 -N192 -0.208687934493325 T173 -S186 -0.213816904536091 D181 -E193 -0.221527687293142 L172 -W177 -0.227726977614851 A170 -R176 -0.22997606322694 H180 -S186 -0.235479750466049 A170 -W177 -0.248585711834834 H175 -G185 -0.25223734708716 L178 -R188 -0.27275633780286 A169 -L174 -0.288593330585813 L174 -D181 -0.297977280119303 A184 -E193 -0.300345856676912 T173 -L178 -0.32647122321152 L172 -L178 -0.371644534355363 V168 -L174 -0.389533559202013 A170 -H175 -0.469697325665521 S187 -N192 -0.640099700596316