[Fri Aug 26 17:08:03 2016] >Input file: TMA1L2R7M1D.pdb >TM segments: 23-65 MAIDEN score = -6.9061 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q24 -L29 0.494000048650628 K33 -Q41 0.418543793758653 E35 -C44 0.41677013277965 I48 -K53 0.389050238931406 Q32 -L37 0.385405810360417 E57 -K63 0.367290342264351 C44 -K53 0.339462396023591 H27 -Q32 0.310958713374271 L55 -E61 0.309969652798419 K39 -C44 0.300302120266969 R50 -L55 0.290660791729234 C44 -K54 0.287848660688927 L58 -K63 0.268488932286846 I23 -R28 0.265187749614309 Q41 -Q51 0.257057550665833 C44 -R50 0.241292000235104 R56 -K64 0.223331821498592 L34 -K39 0.213334079080905 H27 -L34 0.196151918851552 Q32 -Q41 0.189813621914691 E25 -K31 0.188307270568647 Q51 -S59 0.1865519396647 Y30 -S38 0.184737469690667 L55 -K63 0.184709705455259 E25 -Y30 0.181277551582143 K53 -E61 0.18000148475014 E25 -Q32 0.179640430753572 K54 -L62 0.17754332331122 Q41 -S49 0.174235376960509 Q51 -R56 0.16191276037823 Y30 -E35 0.159630464106085 S38 -G46 0.133545559837165 K52 -V60 0.131002293352035 K33 -K39 0.127539204154221 C44 -Q51 0.127189753634516 I48 -K54 0.124922434058075 K53 -L58 0.122682931479587 S45 -K54 0.11624459988745 R56 -K63 0.109035517366488 R50 -R56 0.104650599958783 E36 -S45 0.102290413736003 E35 -R43 0.098633517173555 K33 -T42 0.0956793632836619 G46 -K54 0.0887732730427172 R43 -I48 0.0868703670970952 S45 -K53 0.0863485642294108 L40 -T47 0.084303620304004 Q41 -R50 0.0761070303146372 S49 -R56 0.0729230384406903 R56 -C65 0.072110951089813 S38 -T47 0.071898574575129 T42 -R50 0.0717678371094256 I48 -L58 0.0699743468534124 R43 -R50 0.0627088306582317 K52 -E57 0.0607090238163117 S45 -R50 0.0555144531228065 T26 -L34 0.0545936684713544 L37 -S45 0.0536717766346717 L29 -E35 0.0522243108762215 I48 -R56 0.0506419684524593 L58 -K64 0.0491164224144711 H27 -E36 0.0469899595191691 G46 -K53 0.0445956864516066 E36 -R43 0.0436332584609485 Y30 -L37 0.0401626782091622 Q32 -T42 0.0398668337585524 S38 -S45 0.0395722291964309 K39 -T47 0.0383024659012294 T42 -K52 0.0380285716064375 K53 -V60 0.0345727210528458 K31 -S38 0.0260563333226842 S38 -R43 0.0170438201622654 R28 -E36 0.00997813233309031 K54 -E61 0.00953359466260295 L37 -G46 0.00730093274449573 K52 -E61 0.00128303040972511 E25 -K33 0.000846002608230201 Q51 -V60 -0.00375066745825148 Q51 -E61 -0.00469172960398501 I23 -Y30 -0.0067574669636814 R28 -E35 -0.00979741333657458 R50 -E57 -0.0159618334835279 K52 -S59 -0.0179024745397545 K39 -G46 -0.0186295500884914 E35 -S45 -0.0192562298813665 L29 -L37 -0.0204116721672225 Q41 -T47 -0.0232503491473795 R56 -E61 -0.0238212476654021 L29 -E36 -0.0257430034832611 S45 -L55 -0.031328395533663 K31 -E36 -0.0313362452128647 T42 -Q51 -0.0322141210635565 T42 -I48 -0.0328958010900147 Q32 -S38 -0.0331470109015178 T47 -R56 -0.0368722291768862 R43 -Q51 -0.0449735414398453 K31 -K39 -0.0463345804315933 K52 -L62 -0.0497469471073843 T26 -Q32 -0.0556694261754773 S45 -K52 -0.0593357175715613 K52 -L58 -0.0598073734500417 K53 -S59 -0.0602697911601641 L55 -C65 -0.0617281465496857 S38 -I48 -0.0629108559224263 R43 -S49 -0.0646299931526715 K39 -S45 -0.0651244165012741 Q41 -G46 -0.0741155873649859 E57 -L62 -0.0766718262404273 T47 -L55 -0.0769117162310629 I23 -L29 -0.080285565592692 E35 -Q41 -0.0888841787230445 E57 -K64 -0.0909150079111947 H27 -K33 -0.0924695627513552 Q41 -I48 -0.09296854050953 S49 -K54 -0.095005650512229 K33 -S38 -0.0970271128641143 Q51 -E57 -0.100160706225193 G46 -K52 -0.100679539058994 R50 -S59 -0.104556299373086 I23 -K31 -0.105308367887875 S45 -Q51 -0.106412788003165 G46 -L55 -0.107295770045025 S49 -E57 -0.107978090579438 E35 -L40 -0.108610716892045 K39 -I48 -0.113633292068762 T26 -E35 -0.117143136585804 R43 -K52 -0.117468408136661 R28 -K33 -0.125416669049805 H27 -E35 -0.126076230701892 L34 -T42 -0.127290663611964 K53 -L62 -0.127415570947631 R50 -L58 -0.130398329889537 S59 -K64 -0.136312340998986 L34 -R43 -0.13836782999438 L40 -I48 -0.139103608644089 E35 -T42 -0.139218491161033 Y30 -K39 -0.144110328833108 T47 -K52 -0.147154804904634 T26 -K31 -0.150764868973391 C44 -S49 -0.152644890489646 E36 -T42 -0.152660413776618 E25 -L34 -0.155751402355578 I48 -E57 -0.159472033578884 G46 -Q51 -0.162358341807078 R28 -L37 -0.165345653654315 R56 -L62 -0.166051006178858 Q32 -L40 -0.167676057578136 K54 -S59 -0.168716873102329 L40 -S49 -0.185895610424506 L29 -S38 -0.190310445457136 S49 -L58 -0.190681393790974 Q24 -K31 -0.192817539110403 Q24 -K33 -0.194522201463455 Q24 -Q32 -0.196985124907816 K54 -V60 -0.202263488882253 Y30 -E36 -0.203702528228769 T26 -K33 -0.210392470617836 T47 -K54 -0.210616804530181 L55 -K64 -0.212034201109403 L34 -Q41 -0.213397904176393 K31 -L40 -0.214053401225457 T42 -T47 -0.214909175441547 T42 -S49 -0.216552426608604 V60 -C65 -0.216702423216045 Q32 -K39 -0.221942896210235 R28 -L34 -0.226319338703597 K33 -L40 -0.236296826490161 Q24 -Y30 -0.238052994544124 K31 -L37 -0.239368692720488 C44 -K52 -0.24590782642143 L55 -L62 -0.254174121421289 T47 -K53 -0.259970987467874 L37 -R43 -0.264973610825898 K54 -K63 -0.267784676840388 L37 -T42 -0.269630594794336 L29 -L34 -0.274028216901684 Q51 -L58 -0.279472102227563 S49 -L55 -0.284385538195602 E36 -Q41 -0.285925537088681 L40 -G46 -0.316680806776593 L40 -S45 -0.34268429080135 L37 -C44 -0.351925692820142 E57 -C65 -0.363478421960993 I48 -L55 -0.37611304419344 L55 -V60 -0.389707011486428 L34 -L40 -0.463513959399338 S59 -C65 -0.544802286366093 L58 -C65 -0.546538835426258 E36 -C44 -0.549555589537404 S38 -C44 -0.566839361904399