[Fri Aug 26 17:15:19 2016] >Input file: TMA1S045M1D.pdb >TM segments: 131-159 MAIDEN score = -4.9260 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- E153 -A158 0.926620669491553 L135 -R145 0.434205803495139 A136 -V144 0.430934911844011 W132 -G140 0.219629707884629 R150 -E157 0.219143650671793 Y131 -F146 0.218602209274284 Y131 -A136 0.193634494924677 G140 -R145 0.189897988450434 Y131 -Y147 0.186936266454454 Y131 -G140 0.167519436184984 L135 -G140 0.157838294572001 A136 -Y147 0.155934655922979 A134 -V141 0.141676649710213 L135 -Y147 0.138307652321314 A134 -A143 0.131965369597766 A134 -V144 0.112421014625115 R150 -A158 0.104476435027862 V148 -G154 0.0990819375356375 L151 -A158 0.0739102113210475 Y147 -A156 0.0731835473203915 R138 -R145 0.0719544027015357 W132 -G139 0.0611445477316899 Y147 -E153 0.0565995021363292 R150 -A156 0.0560586899942055 F146 -G152 0.0557586928674798 F146 -L151 0.0536707743034208 R138 -V144 0.0458607648385145 A133 -A143 0.044930574960688 A136 -V148 0.0407457024925186 A134 -R145 0.0317455019609305 A133 -V144 0.0207955607429333 W132 -R145 0.0180431286564431 V148 -E157 0.0157599858712774 A133 -R138 0.00967863418061565 V148 -A158 -0.00884319386433019 V149 -E157 -0.0149504945032639 W132 -Y147 -0.01498423656078 G152 -F159 -0.0192047792557717 A133 -R145 -0.0196585484353815 W132 -A143 -0.0247216590713051 V149 -T155 -0.0257594553657485 A133 -V141 -0.0264298171963178 Y147 -G154 -0.0279614867111171 V149 -A158 -0.0294923351452198 V141 -F146 -0.0304414217084412 Y131 -R145 -0.0317033587603319 R150 -T155 -0.0358176975416078 A136 -L142 -0.0384855654711227 A134 -L142 -0.0429529476977528 G139 -F146 -0.0448235886545634 A133 -V148 -0.0471238476356595 Y131 -S137 -0.0503487989132035 G139 -R145 -0.0531438249763101 F146 -A156 -0.062358239316298 W132 -R138 -0.0629796688504742 G140 -Y147 -0.0647053498002235 Y131 -G139 -0.0692451752197737 W132 -V144 -0.0737939722847067 A133 -Y147 -0.0758559763395699 V148 -E153 -0.0789983741084797 A134 -Y147 -0.0804810149636888 W132 -S137 -0.0812256517472052 L135 -V141 -0.0852736693628717 W132 -V148 -0.0873864797290445 W132 -L142 -0.0936198432237951 R138 -F146 -0.0942356919183318 A134 -F146 -0.0944082999402553 V148 -T155 -0.0957736087934764 Y131 -R138 -0.0964545100365313 A136 -A143 -0.0993114002984301 S137 -R145 -0.102355333459754 L135 -F146 -0.104223385010518 Y147 -G152 -0.106923796459755 L135 -L142 -0.107089076810902 L135 -V144 -0.112357315586205 S137 -F146 -0.113014818973334 V149 -G154 -0.117917315733628 Y147 -T155 -0.121526024856617 F146 -T155 -0.125331130315831 S137 -Y147 -0.128809124990402 W132 -V141 -0.142349430786511 W132 -V149 -0.145946315298593 A136 -V141 -0.147169231239557 A133 -L142 -0.155604701963444 A133 -G139 -0.15746086114528 G140 -F146 -0.158578332311016 G152 -A158 -0.166284308989598 R138 -A143 -0.17068623711937 S137 -L142 -0.183645915945932 S137 -A143 -0.1923557860593 G152 -E157 -0.204218867031118 L151 -E157 -0.210776050176023 G139 -V144 -0.215401405074923 E153 -F159 -0.227266931998258 A133 -F146 -0.230496652655898 A133 -G140 -0.249672011539496 W132 -F146 -0.25381346753833 G154 -F159 -0.266049648103794 A134 -G140 -0.271424088403087 L135 -A143 -0.274080317954414 L151 -A156 -0.302757200351332 S137 -V144 -0.362331910610486 V149 -A156 -0.372043888587767 A134 -G139 -0.377146633953711 V148 -A156 -0.425910906037357 A136 -R145 -0.443146822830069 A136 -F146 -0.455507193971026