[Fri Aug 26 17:15:49 2016] >Input file: TMA1S045M4D.pdb >TM segments: 131-174 MAIDEN score = -2.6742 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V164 -T169 0.70796534953055 F159 -V164 0.648909641087482 G139 -V144 0.632306723811143 G139 -R145 0.581613475829802 V148 -E153 0.568078393443031 V148 -T155 0.529394470792425 L151 -A156 0.450288514700173 R150 -A158 0.378137282717841 A136 -A143 0.364769935408154 G154 -Y162 0.356932070470779 R150 -F159 0.336722542714269 G140 -Y147 0.336172774577047 Y147 -G154 0.329394418200309 V149 -Y162 0.320362268359852 G152 -Y160 0.316230101554015 A133 -G140 0.286703477558594 A156 -K161 0.278765778405541 T155 -T169 0.262542496148736 A133 -R138 0.261708598461548 G139 -Y170 0.260285050654366 V148 -Y160 0.250569910915875 G139 -F146 0.249621092916629 V144 -Y170 0.242634659363103 E157 -Y162 0.201726661477314 G163 -I171 0.193704501803756 W132 -R138 0.181622462995993 Y160 -S166 0.179810506316549 T155 -T167 0.178661306212567 V149 -Y160 0.177273196728761 A158 -G163 0.176387503387005 G140 -L172 0.154721571292093 G154 -K161 0.151322974785483 A133 -R145 0.150304581881943 R150 -S166 0.14762905710144 Y160 -I171 0.141471798538352 Y160 -Y170 0.14094866686857 R150 -E157 0.139824836916282 T155 -T165 0.139574813518961 T155 -I171 0.131737632419368 W132 -G139 0.128050594968068 A143 -Y170 0.122735120221922 K161 -T169 0.121742765144299 Y147 -Y170 0.113235284529239 Y162 -Y170 0.110612612213238 F146 -E153 0.109921304895153 V148 -E157 0.109617530702379 A134 -G140 0.106153775375335 Y147 -F159 0.103243315399707 A156 -S166 0.101169417373159 R138 -R145 0.100037764696347 V149 -T167 0.0998313086341156 G139 -I171 0.0941121889902927 S137 -F146 0.093924148351971 A158 -Y170 0.093685257378006 F146 -T155 0.0921593002950496 A158 -L172 0.0917130584297101 G154 -G163 0.0893141965037905 R138 -A143 0.0890382075240899 T155 -G163 0.088709371537385 A158 -L174 0.0882504779799174 L142 -L172 0.0870902094263206 Y160 -T167 0.0869606304242028 Y147 -T167 0.0857862779651098 K161 -I171 0.0812981779478106 L135 -V141 0.0810114662436723 Y147 -A158 0.0797905055682717 G154 -F159 0.0796018398867728 A156 -I171 0.0688285276688525 S166 -I171 0.0645804349049475 E153 -F159 0.0632663831588728 A158 -F173 0.0625739737038638 Y147 -E153 0.062161560047315 R150 -T165 0.0621209796513181 L135 -A143 0.060553537141077 F146 -P168 0.0592131696820657 Y162 -L172 0.0584327238884708 G139 -Y147 0.0572115607437365 A158 -T167 0.0569693198152281 L151 -F159 0.0554405678371399 V148 -P168 0.0534281280385971 Y160 -P168 0.0524088801551809 Y162 -F173 0.0461128990077473 A136 -V144 0.0444196785906685 T165 -I171 0.041234389422609 V149 -T169 0.039859098719857 A134 -G139 0.0396416157431778 K161 -S166 0.0393107075639794 V149 -E157 0.0376849465279463 G140 -R145 0.0374572908245847 G139 -L174 0.0325070229109912 A156 -T165 0.0288216322345651 V141 -L174 0.0249786691247245 V149 -P168 0.0241702776158861 A143 -I171 0.0226798773340633 G152 -V164 0.0203893023501514 F159 -Y170 0.018360998949432 A158 -T169 0.0176612287900664 A133 -G139 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