[Mon Aug 29 17:19:41 2016] >Input file: TMA1VJ71M1G.pdb >TM segments: 655-665 MAIDEN score = -0.2572 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N657 -R662 0.113829667380938 A655 -L660 0.0323503025920715 A655 -L661 -0.166025752476475 K656 -L661 -0.237337396689286