[Fri Aug 26 17:21:02 2016] >Input file: TMA1ZW02M2D.pdb >TM segments: 223-246_ 259-280_ 285-303 MAIDEN score = -15.2717 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I265 -V303 0.782925787980378 F287 -F292 0.674792217371879 T268 -V303 0.669457301695241 S272 -L298 0.544240314552031 A276 -L295 0.53587864274037 I273 -L295 0.466024386513434 L280 -F287 0.462695441113833 L280 -P286 0.461883465285376 T268 -V302 0.425318127149398 S272 -M299 0.406990525149024 P286 -A291 0.406929306527934 Y234 -F289 0.370465753425135 L261 -M266 0.342728587502567 E228 -P236 0.318991718555713 H223 -S229 0.313556182345773 L280 -Y285 0.306100082456463 I273 -M299 0.297485506806212 G224 -S230 0.291845483446106 S244 -G300 0.290782048797866 S272 -G279 0.284417858149084 G238 -G288 0.272240292972476 G224 -W231 0.257918510558929 S272 -G294 0.254070062714125 P236 -L242 0.234822819090204 L264 -P270 0.231295274401975 L280 -T290 0.231065382040826 N233 -M241 0.227718108298471 G279 -L295 0.227597815259951 I265 -G300 0.221614920427011 K260 -I265 0.219429274780369 Y227 -E232 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