[Mon Aug 29 17:51:07 2016]
>Input file: TMA3TML2M2G.pdb
>TM segments:  317-341

MAIDEN score = 6.2110

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
L325 -T338 		1.26047616504852
I327 -L340 		1.16038686487462
A322 -D337 		0.849331650695272
A322 -T335 		0.798349680677893
Q324 -V339 		0.743117810043572
S326 -L340 		0.723367383615141
D328 -L340 		0.621230071501443
L325 -D336 		0.6067970824357
H321 -D337 		0.513997835970892
I327 -V339 		0.513003179034463
L325 -V339 		0.46517201127563
T323 -T335 		0.465148749144774
H321 -T335 		0.402171406044476
L332 -T338 		0.376010334326827
Q324 -D336 		0.366186778222811
T323 -D337 		0.361083029036157
A322 -D334 		0.340949542043011
S326 -V339 		0.321095882089729
I327 -C341 		0.315636649544676
H321 -D334 		0.272748852134313
I327 -T338 		0.234252257633772
Q324 -G331 		0.231128017707897
Q324 -C341 		0.225476920871388
Q324 -G329 		0.187031553837149
A322 -G331 		0.164942783492408
L333 -T338 		0.161506213664715
D328 -C341 		0.160412651807148
N330 -D337 		0.159498489960932
L325 -G331 		0.153426269209938
A319 -T335 		0.149109002280885
S326 -C341 		0.144944747913167
N330 -D336 		0.142823721420502
A322 -L332 		0.113421501092992
D328 -V339 		0.109069624007969
T323 -T338 		0.103923971226068
L333 -V339 		0.103397396923738
I327 -L333 		0.0887791183175407
G329 -D337 		0.0874526189154077
N330 -T338 		0.0874363582153928
S326 -T335 		0.0833924408854593
G331 -D337 		0.0781443914668349
T323 -N330 		0.0605069739485122
L325 -L340 		0.0591420914129399
S318 -T323 		0.0565873544807709
L325 -D334 		0.0530810251504978
I327 -D337 		0.0513354255922844
A322 -V339 		0.0467760182154642
N330 -T335 		0.0461148402171698
H321 -L333 		0.0446419923035459
S326 -G331 		0.0443145175016486
D328 -D336 		0.0420269462105263
G331 -L340 		0.0402173446662686
G329 -D336 		0.0380634851120778
G329 -T335 		0.0173315397212728
L320 -D337 		0.0146051164749257
T323 -C341 		0.0139643762250647
A322 -T338 		0.0094739643031776
Q324 -N330 		-0.00171661459196848
G329 -D334 		-0.00861204687643058
A319 -Q324 		-0.0103787814240646
D328 -T338 		-0.023342380705456
L320 -D336 		-0.0239790044392769
S326 -D336 		-0.0297047817296645
L325 -D337 		-0.0427424521517485
T323 -G329 		-0.0471287275838217
S326 -L332 		-0.0496777859434943
L332 -D337 		-0.0522743502477079
L325 -L332 		-0.0555968577461652
I327 -D336 		-0.0603143286109442
S326 -D337 		-0.0621018831172401
L332 -L340 		-0.064854600518812
E317 -A322 		-0.0650278252258518
T323 -L340 		-0.0671872245936145
L320 -D334 		-0.06751804448656
Q324 -D334 		-0.067718614112815
G329 -C341 		-0.0684422131796363
T323 -G331 		-0.0730170332318318
H321 -L332 		-0.0801954709226678
H321 -D336 		-0.0808670823759617
G331 -D336 		-0.0858832398120599
I327 -L332 		-0.093616710390278
T323 -D334 		-0.09623426769792
Q324 -T338 		-0.099721996792886
S326 -L333 		-0.101197575548167
H321 -T338 		-0.112787928608351
D328 -L333 		-0.113424212861985
N330 -L340 		-0.129368835651181
A319 -D336 		-0.12965562714069
T323 -V339 		-0.132643122123751
Q324 -D337 		-0.144475643363899
G329 -T338 		-0.145151802959822
L320 -L325 		-0.147942463052445
Q324 -T335 		-0.150963053498515
L325 -C341 		-0.15492174524458
G331 -V339 		-0.162630732522633
D328 -D337 		-0.173850727917803
G329 -V339 		-0.181689952967835
S326 -T338 		-0.185836189129569
L325 -L333 		-0.190535357582196
D334 -V339 		-0.205442823952115
G331 -T338 		-0.228611239577608
N330 -V339 		-0.24888774372966
L325 -T335 		-0.250614326134981
L325 -N330 		-0.252611578757125
Q324 -L332 		-0.254769049622222
T323 -L332 		-0.254997988926423
Q324 -L333 		-0.255348341531876
T323 -L333 		-0.259015205510282
N330 -C341 		-0.270201396901766
G329 -L340 		-0.279639204365392
A322 -L333 		-0.297663620671716
L320 -T335 		-0.30213770720053
L332 -V339 		-0.312998915047473
Q324 -L340 		-0.434115129630561
A322 -D336 		-0.451060408219471
T323 -D336 		-0.480011852391406