[Fri Aug 26 18:23:23 2016] >Input file: TMA3XGP1M1D.pdb >TM segments: 206-223_ 237-257 MAIDEN score = -13.8811 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A218 -I239 0.524973846417518 F217 -L242 0.513855662334626 A218 -L242 0.344323205320213 A210 -A245 0.329415590361465 G212 -A218 0.300244272852161 G215 -S221 0.26373321301338 G215 -Y222 0.256373126770665 L206 -G214 0.250021039944688 S221 -L242 0.246900912752719 F240 -G246 0.240845029714005 T213 -L242 0.226542566644954 A218 -A245 0.216370171256131 G214 -S221 0.208108705149224 W219 -M243 0.183302562390058 L206 -I211 0.179711903436976 G214 -I241 0.173026936560827 W219 -V238 0.172613353915766 G214 -Y222 0.166607388955206 G215 -M243 0.165175587555983 G214 -M249 0.15669094535536 T209 -F216 0.152494821353584 A210 -M249 0.143829407765416 G246 -G256 0.140446960648355 A210 -G246 0.137919650007 Y220 -M243 0.131603270864815 M243 -C251 0.127070227902 T213 -G246 0.119918218244651 A218 -V238 0.117515607497197 A218 -G246 0.115377930986356 L206 -N253 0.113035733369863 L247 -L255 0.111943645453448 G215 -V238 0.110672160070428 A210 -L244 0.110010261529442 S221 -A245 0.109318543663761 G215 -A245 0.106328723146577 I208 -T213 0.105312397651039 F217 -G246 0.103672597623909 A207 -F216 0.10272075980549 T213 -I241 0.102386106902035 I223 -V238 0.101066240576015 S221 -I241 0.0996654891256146 G212 -G246 0.0958304920038064 A245 -N253 0.0933787616056998 Y222 -M243 0.0889175920028773 M243 -T250 0.0885924731579595 G212 -Y220 0.0883155588741378 G246 -I254 0.0848168186591574 G248 -G256 0.0829290688050257 G215 -G246 0.0827737367362249 M237 -A245 0.0803475496183674 Y222 -F240 0.0785819321016561 I239 -L247 0.0770609199071854 G248 -G257 0.0736650703340149 G246 -N253 0.0698627061448232 G215 -I239 0.0613470614645197 A245 -I254 0.0599108723895947 A210 -L242 0.0577218880687678 G214 -I239 0.0563505912322793 W219 -I241 0.0557975130472279 G212 -A245 0.0556651135700443 G214 -G248 0.0528778836773767 Y220 -L242 0.0526955156787627 Y222 -I239 0.0488221670116591 V238 -G246 0.0463706727704043 T213 -S221 0.0463619789058587 A210 -A218 0.0462146521422215 L244 -C251 0.0443510640379845 T209 -G246 0.0393204542191619 I211 -G246 0.0336173054032773 I208 -F217 0.0311237502849142 T250 -G257 0.0306750944362526 F216 -M243 0.0292579818156762 T209 -A218 0.0279979578166007 T213 -Y222 0.0275130257949425 T209 -A245 0.0273730452479679 I223 -L242 0.0271553103898832 G212 -L242 0.0256095529727034 G214 -L247 0.0229916805949282 I241 -M249 0.0197257270770148 A210 -M243 0.0187759296832644 A207 -M249 0.0184268148799311 T250 -L255 0.00940130131413142 I223 -M237 0.00830870285766139 G246 -L255 0.00818389909835648 I211 -M249 0.00723993823189506 T213 -M243 0.0064309301151213 F240 -M249 0.00525481634300284 M243 -G248 0.00435755401687121 I211 -A218 0.00276739035406592 T209 -F217 0.00141125382163665 G214 -L244 -0.00236755491804441 I241 -T250 -0.00255464360316049 G212 -W219 -0.00257276321533073 L244 -G252 -0.00360948193141208 G214 -F240 -0.00602927596581182 I239 -G246 -0.00659315250182879 Y222 -V238 -0.00681712953783808 L206 -G215 -0.00732432718527054 G214 -L242 -0.0115940828250292 G215 -I241 -0.0126726733636069 F217 -M243 -0.0146560493575978 I211 -W219 -0.0156981033478347 C251 -G257 -0.0188451128543994 T213 -I239 -0.0203012447756197 A210 -T250 -0.0236505299896916 A207 -G214 -0.0245333227090123 G214 -M243 -0.0251072798025884 A207 -G215 -0.0267524427953933 Y220 -F240 -0.0276227809562379 M249 -G257 -0.0277713116350995 V238 -A245 -0.0286274278460787 L206 -G246 -0.0305480545104415 L206 -G256 -0.0307600229946718 W219 -F240 -0.0325601421656811 G212 -S221 -0.0388768817425806 M237 -M243 -0.039530940565861 A210 -Y220 -0.039936452658202 F216 -I241 -0.0405509676193154 M243 -M249 -0.042568042765661 L242 -M249 -0.0469097782878869 T213 -M249 -0.0482641135305961 A245 -C251 -0.0500920181375553 F240 -G248 -0.0554255663738663 Y220 -A245 -0.0554434391393133 F216 -I223 -0.0555367731971872 A210 -G248 -0.0567546941267683 F216 -L242 -0.0568518134050109 A207 -G246 -0.0609677514387254 W219 -A245 -0.0617469606589365 Y220 -I239 -0.0622429198940013 I211 -Y220 -0.0649880887781217 F216 -V238 -0.0660876086726976 A210 -N253 -0.0667372079559498 A218 -L244 -0.0676164089634606 I208 -F216 -0.0677555930214417 L244 -N253 -0.0714652756968146 F217 -L244 -0.0731886096900789 I239 -G248 -0.073887189282503 T213 -Y220 -0.0742084209884495 I223 -I239 -0.0774247837169071 F216 -I239 -0.0782608318825369 A245 -G252 -0.0818601339717793 G248 -L255 -0.083651744116203 L206 -M249 -0.0836853372234414 I223 -F240 -0.0855346615070953 L247 -I254 -0.085753445694396 A210 -F217 -0.0858737979837603 I211 -A245 -0.0895325365815061 L247 -G256 -0.0915595740488468 S221 -L244 -0.092220535451017 L242 -T250 -0.095653540061619 F240 -L247 -0.0961736388181871 L206 -T250 -0.0988166340040514 F217 -A245 -0.101631219569466 G215 -L242 -0.103138074760969 T213 -A218 -0.104204836008564 L206 -G252 -0.105976766993308 F217 -F240 -0.109263458064651 Y222 -L242 -0.112643432010019 G246 -G252 -0.115107111366771 S221 -F240 -0.119730356286825 F216 -A245 -0.120679800999477 G215 -I223 -0.121729769064866 I241 -G246 -0.125014822937759 F217 -Y222 -0.126551648832876 A210 -L247 -0.127659383822471 T213 -A245 -0.128735324909853 L242 -G248 -0.133495198140614 T209 -M249 -0.134674365685905 Y222 -M237 -0.135547828316025 M249 -G256 -0.135615714828254 T213 -V238 -0.143979697432361 W219 -M237 -0.144193739142761 I223 -I241 -0.156722068325005 I211 -L242 -0.157345553571964 S221 -M237 -0.158143937721333 G214 -V238 -0.158737110124491 I211 -F216 -0.160970266652352 L206 -A245 -0.163219967612918 Y220 -M237 -0.164516017796405 G215 -Y220 -0.165143259435851 S221 -I239 -0.165638312918318 G248 -N253 -0.169964330227547 A210 -F216 -0.171411354756518 G214 -G246 -0.175867651526215 F216 -Y222 -0.178625543146624 I211 -F217 -0.182674998306211 A245 -T250 -0.186226301712627 S221 -M243 -0.186491571590637 F217 -M237 -0.190428827368666 Y220 -I241 -0.195879223886631 G214 -W219 -0.196786995733588 G248 -I254 -0.197428485480929 T209 -G215 -0.206167844960356 G214 -Y220 -0.209657587067637 F217 -I223 -0.214330081818429 I241 -G248 -0.215052952496887 L244 -T250 -0.21668871563098 A207 -T213 -0.223600000805827 F217 -I241 -0.225389814594005 Y220 -V238 -0.227659717350055 G214 -A245 -0.228032007669419 F216 -S221 -0.234124791625673 C251 -G256 -0.23896654919769 T250 -G256 -0.241618443537114 L206 -T213 -0.24213131546109 G212 -F217 -0.243880613512022 Y222 -I241 -0.244248313515843 L247 -N253 -0.244705361070888 G246 -C251 -0.246563006485424 I211 -M243 -0.250228915847041 A218 -I241 -0.256911394424311 I208 -G215 -0.256932018381831 L206 -G212 -0.262412814069946 I208 -G214 -0.269780752617379 F217 -I239 -0.270321787073801 W219 -I239 -0.280315601716303 A218 -F240 -0.281007229176192 T213 -W219 -0.281728734559246 I239 -A245 -0.282744339880357 A207 -G212 -0.283437266940705 T209 -G214 -0.29165137853923 M237 -L244 -0.29540606841097 M249 -I254 -0.296262168226336 I241 -L247 -0.325305120737323 V238 -L244 -0.328780825393789 F217 -V238 -0.331352842057916 V238 -M243 -0.333324349049913 F240 -A245 -0.338968789675931 L244 -M249 -0.339443930746263 W219 -L242 -0.344519513079947 I239 -L244 -0.369946310796001 M237 -L242 -0.376301373420568 A218 -M237 -0.377442801061506 L242 -L247 -0.390205844203896 S221 -V238 -0.393770201605889 A218 -M243 -0.403697639142653 L247 -G252 -0.404251821968646 G252 -G257 -0.420655391209752 A218 -I223 -0.46293569066099 M249 -L255 -0.468375734324724 A210 -G215 -0.488523558743237