[Fri Aug 26 18:27:01 2016] >Input file: TMA4AU68M2D.pdb >TM segments: 228-283 MAIDEN score = 18.1248 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K232 -H248 10 L234 -Y246 8.27425746131871 I235 -I244 2.16574938551619 Y236 -I244 1.87095730127578 K255 -K260 1.44186508170685 I235 -I243 1.31882812576087 I233 -H248 1.06035396175233 Y236 -I243 0.923675100939453 I233 -V247 0.781109304605081 K237 -I243 0.73531893664148 L234 -I243 0.718227015650968 K237 -N242 0.603348660011918 K254 -I259 0.588831014228652 I243 -R264 0.583463492876062 V247 -I262 0.556755062451504 V247 -L263 0.534631294800109 I244 -R264 0.517057815975793 V247 -R264 0.495253931881336 K254 -K260 0.473642041188691 L234 -V247 0.458296118498762 I235 -N242 0.450392165582725 E251 -P265 0.415901849215436 L234 -I244 0.412591507826308 V247 -L252 0.406713200055304 Y246 -V266 0.404956359970779 D238 -I244 0.377880356372225 Y246 -L263 0.366547506447405 M273 -I278 0.347278416190549 Y246 -V269 0.337833040080251 Y250 -K255 0.335547245162036 N242 -R264 0.325508812238233 H248 -S261 0.302832385468457 V269 -I278 0.292731353142939 V269 -V281 0.279895843114807 K232 -Y246 0.277043144417622 G245 -L263 0.270864376212427 G245 -S261 0.264625933890806 L234 -P265 0.239715916884276 K237 -R264 0.225001530960138 H248 -P265 0.217451233580081 I235 -V247 0.216241893456062 H248 -K257 0.208963645418986 D277 -L282 0.201371743556513 T228 -H248 0.19995343110692 T228 -I233 0.198086356113054 S249 -P265 0.197556344264398 Y246 -I262 0.196383888557614 Y250 -K257 0.195970575877484 V269 -H276 0.195102392524564 Y236 -F268 0.191941513175329 K232 -Y250 0.18457945090531 Y246 -S261 0.18432796859634 K232 -E267 0.183104164956343 T228 -I235 0.176087509603892 V247 -E267 0.175067554268381 G229 -H248 0.173901901897033 F268 -N280 0.173720288571704 H248 -P256 0.172459677052819 E251 -L263 0.170067599464634 P256 -L263 0.166922822450267 I235 -H248 0.16471445069052 Y246 -E267 0.161145716299662 I233 -Y246 0.160762363763825 S231 -Y250 0.160717707742881 I235 -Y246 0.159961158567564 K237 -L263 0.158964966608246 K232 -E251 0.158068899936904 K255 -R264 0.154844901868207 L234 -G245 0.153134863885119 K232 -F253 0.148664688727711 S249 -K257 0.14104313635996 K254 -I262 0.135427783480315 I235 -D241 0.130255704615676 Y230 -I235 0.127034032590117 I233 -E267 0.127002075711528 K255 -L263 0.125284637944516 K255 -I262 0.121400841727679 S261 -V266 0.120080017538323 I233 -I262 0.11930658562778 E251 -T258 0.119019762980116 K232 -R264 0.118649423371704 S249 -L263 0.115561308350846 G229 -L234 0.114094699049989 Y236 -Y246 0.113648901640247 G229 -V247 0.113584029325313 G245 -V269 0.113495533757712 P270 -M279 0.10706223817261 K232 -I262 0.106168702732225 D238 -R264 0.105470071798653 I233 -I244 0.105140321860363 I235 -R264 0.103912497753915 Y250 -I259 0.100990570828889 H276 -T283 0.0975952387231485 H276 -V281 0.0968727999290139 L234 -L252 0.0945103383620931 L234 -V269 0.0933661616650183 G229 -Y250 0.0927316991038953 L234 -V266 0.0903415040353366 E267 -L282 0.0883820222992153 Y250 -I262 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