[Fri Aug 26 18:27:10 2016] >Input file: TMA4AU68M3D.pdb >TM segments: 103-115 MAIDEN score = -2.2652 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Y110 -L115 0.315499374871858 K104 -I109 0.125913843282449 V105 -S113 0.123454455358715 L106 -L114 0.113029839867369 L106 -L115 0.0861981174451278 V105 -N112 0.0600785403450526 P103 -Q108 0.0593060186435732 P103 -A111 0.0209386291296036 F107 -L114 -0.0135089806496689 F107 -N112 -0.0165970765390004 I109 -L114 -0.0500265943833806 Q108 -L115 -0.0645906289867446 F107 -S113 -0.0685560354539374 F107 -L115 -0.0826946873956573 K104 -S113 -0.0913836687990845 K104 -N112 -0.10207972358603 I109 -L115 -0.121213118159083 Q108 -L114 -0.136744586139523 P103 -N112 -0.143974323302953 P103 -Y110 -0.145763720138008 Q108 -S113 -0.16857738778112 K104 -A111 -0.180512171403561 L106 -N112 -0.20362980201849 K104 -Y110 -0.210229324643114 L106 -S113 -0.216387748003974 V105 -Y110 -0.252930364616574 P103 -I109 -0.275242222835965 L106 -A111 -0.291804177827669 V105 -A111 -0.333139990392269