[Fri Aug 26 18:27:35 2016] >Input file: TMA4BJ06M2D.pdb >TM segments: 450-466_ 469-478 MAIDEN score = -5.1581 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C461 -L469 0.720103108704923 Q454 -P474 0.610635531073003 R455 -C461 0.390028887036733 C461 -P466 0.376599395435646 R453 -L458 0.376413042981509 G451 -A477 0.269974934891825 Q454 -E473 0.264419482325446 L469 -P474 0.182543679496233 Q452 -A457 0.170236617597357 G450 -S476 0.162551431072787 R453 -A477 0.148366582386207 L458 -P466 0.143934984249112 Q454 -C461 0.141872991522652 Q454 -A459 0.140640106992837 A457 -S476 0.119517739078552 A464 -I470 0.117533426299672 G450 -P474 0.110762483166285 L471 -S476 0.104393136209206 G451 -S476 0.103774576454389 R455 -E473 0.103596675712468 I470 -T475 0.0990803272477745 Q452 -T475 0.0972064473156955 G451 -P474 0.094319314090457 R453 -T475 0.0889089155909296 A457 -T475 0.088132753629182 R453 -R460 0.0821550100376698 R460 -L471 0.0768035609207869 A457 -A464 0.0763545288792118 N465 -I470 0.0754559522450203 R460 -L469 0.0725026654510534 L458 -T472 0.0694973067546032 Q454 -I470 0.0665882336762396 R455 -T475 0.0659656227601386 R455 -A464 0.0633564865626497 G450 -L458 0.0561948454270205 Q454 -T472 0.0540519841900018 R455 -V463 0.0526163318225507 R455 -R460 0.0519617556773622 Q454 -A477 0.0513978674026521 R455 -L471 0.050314279422305 V456 -T475 0.0493849936023167 L458 -L469 0.0492543661420202 E473 -L478 0.0479615338785884 A457 -L469 0.0446742945388068 R455 -P474 0.0422118007230661 G450 -A459 0.0415235392815361 G450 -E473 0.0370875940482924 A459 -L471 0.0329448313743419 A459 -P466 0.0317807619170711 R455 -T472 0.0300383350529976 A459 -L469 0.0244840777438626 Q452 -S476 0.0226120120884572 R453 -T472 0.0174920858024916 A459 -I470 0.0135547787808949 A457 -I470 0.0107226433111336 V456 -P474 0.0106122006696687 V456 -L471 0.00855701966573719 G450 -A457 0.00669971384811152 T472 -L478 0.00654815972322975 G450 -T475 0.00584671202726228 Q454 -V463 0.000808073789423602 A457 -N465 -0.00339865185278149 R453 -P474 -0.00593054014753758 R455 -I470 -0.00629270354532085 Q454 -L469 -0.0108495144131373 L469 -T475 -0.017455296476184 Q454 -T475 -0.0175534095896969 G451 -E473 -0.0180781930668519 A457 -P466 -0.0195362704518103 G451 -A459 -0.0209103072936745 V456 -A464 -0.0214539204665369 V463 -L469 -0.0228337273307968 G451 -T475 -0.0228922476811202 L458 -T475 -0.0245344651716968 Q452 -L478 -0.0313660549201265 G450 -R455 -0.0316824916459835 Q454 -L478 -0.0364953157281525 C461 -T472 -0.0374937152653005 I470 -S476 -0.0416218134228501 A459 -N465 -0.046064795795757 Q452 -R460 -0.049980176305557 Q452 -P474 -0.0501934128485915 R460 -I470 -0.0520416916635457 A457 -T472 -0.0531900643417349 R453 -L478 -0.0597899113779539 V456 -L469 -0.0598532796507039 Q454 -L471 -0.0626234659678584 A459 -P474 -0.0633393188964746 A457 -E473 -0.0688462562329754 R453 -L471 -0.074205790348552 L458 -E473 -0.0744434415346565 G451 -V456 -0.0751606749255131 L462 -I470 -0.0757865530379369 R453 -S476 -0.0785881343960535 Q454 -L462 -0.0847470973919169 L458 -N465 -0.0944610057992032 Q452 -A477 -0.0955235187616981 T472 -A477 -0.0960479808865049 R460 -P474 -0.0999765278641482 V456 -N465 -0.100117667675443 R455 -S476 -0.102848684057367 V456 -C461 -0.106096471415478 R455 -L469 -0.106138748528155 R453 -E473 -0.109644870262382 P466 -L471 -0.111767494075644 L471 -A477 -0.116808421851893 R455 -L478 -0.117974342650569 Q454 -R460 -0.122901058854367 G451 -R460 -0.127812697482201 G450 -V456 -0.129663259851817 Q452 -A459 -0.131921182597472 V463 -I470 -0.132133416245099 C461 -I470 -0.132772197342622 A457 -P474 -0.148403439475052 N465 -L471 -0.151028272606746 Q454 -S476 -0.154660116309818 A457 -V463 -0.155616090618935 R453 -L462 -0.161548188556769 A459 -A464 -0.174229340688821 G451 -L458 -0.17680533621375 G450 -A477 -0.190331238082976 G451 -L478 -0.190540391222623 A457 -L471 -0.190606270227118 Q452 -C461 -0.194075391389869 R460 -N465 -0.209035531924527 R453 -A459 -0.210901257975713 C461 -P474 -0.223860471040957 L462 -L471 -0.234484088247581 R460 -P466 -0.25557765386769 R455 -L462 -0.259647486472979 V456 -V463 -0.262071013962457 V456 -L462 -0.26516555982446 G451 -A457 -0.266371493471563 A464 -L469 -0.273314323355176 L458 -A464 -0.274803447590393 L458 -L471 -0.276715486679837 R453 -C461 -0.279141403773254 L462 -L469 -0.283678566997256 A457 -L462 -0.302714178834085 L458 -I470 -0.311385169303497 G450 -L478 -0.401085364278206 L458 -V463 -0.461751003442908 L458 -P474 -0.472115252075227 Q452 -L458 -0.478405612392299 C461 -L471 -0.539737334716203