[Mon Aug 29 18:16:03 2016] >Input file: TMA4BNL4M6G.pdb >TM segments: 350-360_ 442-447 MAIDEN score = -0.1130 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G352 -N359 0.224503000423762 G352 -A358 0.20300820642777 K353 -N359 0.162349592166019 L351 -E356 0.125379423597332 L354 -V360 0.101164293899084 L354 -L444 0.090209552774013 T350 -L357 0.0854465051885658 G352 -L357 0.0838213646509318 T350 -E356 0.043359706127438 L351 -A358 0.0386646553827614 G352 -V360 0.0211497494919466 L354 -N359 -0.0870143634154075 L351 -N359 -0.121401320893328 K353 -A358 -0.122723215958795 R355 -V360 -0.156386611768278 T350 -R355 -0.195718113765396 K353 -V360 -0.208855998234305 L351 -L357 -0.399997811065054