[Fri Aug 26 18:32:08 2016] >Input file: TMA4D0T7M1D.pdb >TM segments: 38-52 MAIDEN score = 1.9051 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I44 -V50 0.576733186627597 A46 -Y51 0.501260181044706 C45 -V50 0.43307799080094 G43 -Y51 0.352133358716725 I41 -A46 0.165746876191984 S40 -C45 0.127282220448813 I41 -C47 0.115226320292694 T42 -C47 0.110735162142655 S40 -A46 0.0973058375082474 C45 -Y51 0.072796677650846 C45 -A52 0.070304907113041 C47 -A52 0.0600963076516567 L39 -I44 0.050997067389027 I44 -A52 0.0225897560303974 T42 -V50 0.0149110082719268 I41 -V50 0.0114725824163751 G43 -L48 -0.00565011226077772 T42 -G49 -0.00824966912823832 T42 -L48 -0.0100605463754411 I41 -L48 -0.0200100127578793 L39 -C45 -0.0311498458338 I41 -G49 -0.051771114038623 I44 -G49 -0.0762689430760961 G43 -G49 -0.109715349184331 A46 -A52 -0.173978857209401 I44 -Y51 -0.19346562890889 G43 -V50 -0.197282423780082