[Fri Aug 26 18:33:07 2016] >Input file: TMA4D7T4S1D.pdb >TM segments: 415-422_ 427-445_ 616-650 MAIDEN score = 5.7104 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I421 -L428 1.2347032719407 I444 -C624 1.07541451399621 L619 -C624 1.04121171739187 I618 -F626 0.963351985673729 L617 -F626 0.897990544448149 L441 -E621 0.800297727497338 K420 -F429 0.797482085683844 I618 -M645 0.758007012560628 H620 -L644 0.725520475113266 V440 -E621 0.69178682700208 L617 -Y625 0.690166801511599 I616 -F630 0.662290938180922 I618 -C624 0.65268620355348 S642 -F647 0.626213756933776 K442 -C624 0.620331435508162 G419 -F430 0.619047068560127 I618 -Y625 0.610844477343313 S417 -F430 0.599337492956339 L441 -G622 0.591988526251024 I618 -Y627 0.54440987105708 S422 -L428 0.520436121639684 F626 -L633 0.502793618121576 L619 -F626 0.49499710386391 S417 -F429 0.445981014247317 G419 -F429 0.410796730189963 N443 -H620 0.399145777391611 D418 -L428 0.395514190512822 G628 -L633 0.3701180673744 L617 -G628 0.367401977888023 Y625 -G646 0.358375557720275 E621 -G646 0.344560592506835 E621 -F626 0.337558738625193 S422 -G427 0.318605107081405 N445 -Y627 0.317437413513143 I444 -G622 0.30902879866608 I616 -F626 0.304705535058842 G628 -S635 0.29734308681914 P439 -G622 0.294807018452415 Y627 -R637 0.292956015312277 N416 -F430 0.284637998889468 Q634 -M645 0.275564541294489 Y625 -Q634 0.275057334070867 L617 -Y627 0.269771080560823 H620 -S641 0.269649248055218 L617 -C624 0.262229423816565 D418 -G427 0.25960428548401 C624 -E632 0.250904863371728 L617 -G622 0.244021574472649 R637 -M645 0.24147033237859 Y627 -L633 0.239168447202765 S635 -S641 0.19680955199864 N443 -Y627 0.196699665124877 I618 -G628 0.195089000899209 I421 -G427 0.194162413948534 Y627 -S635 0.177584381070313 Y627 -M645 0.175812382697179 F640 -G646 0.174925634559013 I616 -Y627 0.171676061768659 Y625 -S641 0.169910907370838 D418 -N432 0.165506393116759 I444 -I616 0.164331103461626 Y625 -E632 0.158597206405087 S417 -S431 0.158028294731787 N445 -E621 0.15505983248356 N443 -L617 0.153450390597009 G622 -M645 0.15103676254461 N445 -L617 0.149855145881446 N445 -G622 0.145034897717017 H620 -M645 0.143401758597185 S422 -F430 0.142718716887265 S629 -M645 0.142079616289782 I616 -L644 0.13885152096846 H620 -S642 0.13670278701538 K420 -L428 0.13613976032936 F626 -F640 0.135530439234972 S629 -R637 0.135422177078129 N443 -E621 0.133996048175887 L633 -P638 0.12822910515259 S641 -D648 0.125144329073102 G419 -G427 0.123313632241296 G622 -Y627 0.120515592280498 L617 -S631 0.119914790866114 L441 -L617 0.119808749940904 Q634 -S642 0.119760578845201 F433 -T438 0.118524413310067 L619 -L633 0.117066086888334 E621 -L644 0.115942549614534 L441 -S623 0.113824228380741 N415 -F433 0.112229523083077 S417 -L435 0.109969434332347 L619 -S641 0.109727580571494 E632 -P638 0.107798979578853 H620 -F640 0.106330439064158 S431 -L436 0.105982628640033 P638 -M645 0.105799840023827 C624 -S629 0.105616472662133 G622 -G646 0.104297061881537 N445 -I616 0.103231064853351 L435 -K442 0.102367760005754 G437 -K442 0.101767965446375 G419 -N432 0.101191724326251 L633 -L644 0.0977547005084172 I444 -G628 0.090082120712653 F640 -M645 0.089680795749409 Q634 -D639 0.0896253720805058 Y625 -F630 0.0893110028411357 F626 -K643 0.0864796140261124 L619 -M645 0.0852214476886335 P439 -I444 0.0841710732092998 L619 -F640 0.0838165444030023 Q634 -S641 0.0833329188552971 G419 -L428 0.0799946401669445 F640 -D648 0.0765774328737138 S631 -F640 0.0762282124358107 G437 -G622 0.0760366615867696 H620 -Y627 0.0752611815897668 L435 -V440 0.0750038243413607 L636 -L644 0.0721446995112078 Y627 -E632 0.0717334481268423 D418 -F433 0.070104293069827 N416 -L435 0.0696628207932153 I618 -Q634 0.0693277887867182 S431 -G437 0.0673345848013489 Q434 -V440 0.0657621689210828 I618 -K643 0.0656328681898546 Q634 -L644 0.0647815852199831 F626 -P638 0.0645694581282311 N416 -L428 0.0636518167396423 V440 -I618 0.0612758542799874 I616 -L636 0.0603634814998038 I618 -P638 0.0577238544756349 G628 -R637 0.0563451512237867 Y625 -S635 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