[Fri Aug 26 18:33:14 2016] >Input file: TMA4EE11M1D.pdb >TM segments: 455-477 MAIDEN score = 2.2817 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q458 -A463 0.849206079966216 L457 -D462 0.590727723383649 Q458 -H465 0.485090357105905 Q458 -A464 0.474605602775096 H456 -H465 0.342358806812141 H456 -S467 0.312977238274048 L457 -A464 0.299046284825018 L457 -A463 0.182278525899916 A455 -A464 0.167970625503408 Q458 -S467 0.162387997066332 H456 -A464 0.158277064692942 H456 -V466 0.145699795033141 Q458 -F469 0.130636658686641 A455 -H465 0.12867963188903 V460 -S467 0.127833431578059 S467 -A472 0.122096923952085 D462 -D468 0.120091777541925 S467 -L473 0.115631296532283 L461 -S467 0.115093529744209 S467 -P474 0.0981290557498333 D468 -N475 0.0862828142889054 A464 -L470 0.0846027199106003 A455 -S467 0.0826306120382057 P471 -G476 0.0733963579392301 D468 -P474 0.0695112276174801 L461 -F469 0.0660939241432921 L457 -S467 0.0649109210321921 H465 -L470 0.0631503075385851 L470 -G476 0.0607382740985562 L457 -H465 0.05982044151096 H456 -D468 0.0589223269963037 A463 -A472 0.0553025525502577 A455 -A463 0.0519369527415008 D462 -F469 0.0496259911565677 S467 -N475 0.0476157133030775 V466 -P471 0.0451295217420307 V466 -N475 0.0364711537220135 A463 -L473 0.0354477684336381 S459 -D468 0.0313542057719789 F469 -G476 0.0312023774609376 Q458 -V466 0.0279649450755155 L470 -N475 0.0217779036169244 H456 -A463 0.0189808834318224 D468 -L473 0.0179033192042723 V466 -A472 0.00912715183270818 A455 -D462 0.00842581757715255 V460 -H465 0.000811412360151254 D468 -G476 0.000310352968427741 Q458 -L470 -0.00169174928109594 A464 -P471 -0.00453750629143101 S459 -F469 -0.00530365000969013 A463 -P471 -0.00633651202109897 H456 -D462 -0.00659661367778908 V460 -V466 -0.0117451639269124 F469 -N475 -0.014780583511548 S459 -S467 -0.0157911149486454 V466 -P474 -0.0197634556652555 D462 -S467 -0.028899280285881 Q458 -D468 -0.0438609496868656 A463 -F469 -0.0786135108723673 A455 -L461 -0.0928726733152949 Q458 -P471 -0.0983516770057493 A463 -L470 -0.106356658704502 A464 -F469 -0.108246449299699 F469 -P474 -0.119565220350503 L461 -D468 -0.132129475747687 L457 -D468 -0.144674769069423 A472 -L477 -0.155328545874258 L457 -V466 -0.164369037194865 A463 -D468 -0.177359892401279 V466 -L473 -0.18153201281612 H465 -P471 -0.2073106335024 L461 -V466 -0.245102247158022 H465 -L473 -0.250059767389238 S459 -V466 -0.255290930910927 S459 -H465 -0.349711060869617 H456 -L461 -0.351216629930668 S459 -A464 -0.362922525681336 A455 -V460 -0.366208345533695