[Mon Aug 29 18:21:59 2016] >Input file: TMA4EXM8M6G.pdb >TM segments: 437-448 MAIDEN score = -1.3545 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q441 -A447 0.242242763249237 V438 -S444 0.12099800579195 G440 -E445 0.0668046145834984 G440 -L448 0.0497774182776782 G440 -D446 0.0176403447847049 L439 -A447 -0.000194221609334022 L439 -D446 -0.00795311706158186 L439 -E445 -0.00992472368186562 I437 -V443 -0.0311610886600662 D442 -A447 -0.0478094972014684 I437 -D442 -0.0776103357662787 G440 -A447 -0.0818402041189392 Q441 -L448 -0.148791114676335 Q441 -D446 -0.153579164938054 V438 -V443 -0.271568357691261 D442 -L448 -0.272930611103164 L439 -S444 -0.342506921534125 V443 -L448 -0.406100900572553