[Mon Aug 29 16:46:36 2016] >Input file: TMA4XML5M5G.pdb >TM segments: 370-387 MAIDEN score = -2.2608 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K373 -C386 0.375956541285507 G372 -Y384 0.349742664504729 S375 -Y384 0.34941815435023 G370 -L376 0.271698619496739 L379 -C386 0.261341198173 S371 -L376 0.252102662420443 L380 -D385 0.197239846453619 G372 -C386 0.16701160459318 G372 -L380 0.148349296180791 S374 -Y384 0.147440959337917 N378 -F383 0.145695909153624 I377 -C386 0.128829425175275 S374 -R382 0.123940914236407 S374 -C386 0.113378011424635 N378 -T387 0.107672445635149 S375 -T387 0.0936437187629753 S371 -I377 0.0775525043514786 R382 -T387 0.071381216483332 G370 -I377 0.0671522628799162 G370 -N378 0.0618818933461639 L376 -R382 0.050230115346416 I377 -D385 0.0474631783617272 L376 -A381 0.0472413904761666 G372 -R382 0.0359766930279966 L380 -T387 0.0311480036093257 S374 -D385 0.0293522796250597 A381 -C386 0.0156619451330626 S371 -N378 0.00510531364567779 N378 -D385 -0.0060348738688516 I377 -R382 -0.0134428176341266 G372 -D385 -0.0146383810128754 S375 -D385 -0.0298300079900215 G372 -I377 -0.0342458431636992 K373 -A381 -0.0382611718063813 G372 -N378 -0.0391422357177666 G372 -A381 -0.0406076426128772 S375 -A381 -0.0506557234280187 K373 -N378 -0.0565249600177959 K373 -F383 -0.0572269860979429 L379 -D385 -0.0635622323326559 K373 -R382 -0.0708080693184083 S375 -R382 -0.0716378313693296 L376 -T387 -0.0716706694699449 K373 -Y384 -0.0751323783075788 I377 -Y384 -0.0854851705275739 G372 -F383 -0.10127271608537 K373 -L379 -0.124691258199249 S371 -L379 -0.126255924841494 G370 -S375 -0.147462661958762 N378 -C386 -0.151991404330987 S374 -F383 -0.154592376394318 K373 -L380 -0.171499659635401 G372 -L379 -0.172722148753457 L376 -Y384 -0.174872838521552 L379 -T387 -0.182570632604406 S374 -L380 -0.186303917950157 S374 -A381 -0.198256375022561 I377 -F383 -0.212536800203781 L376 -F383 -0.229782135243637 S375 -F383 -0.252764428155499 N378 -Y384 -0.26566825021207 L379 -Y384 -0.290694662782737 L376 -D385 -0.305995754902515 S375 -L380 -0.306146348764664 S374 -L379 -0.317823416126561 L380 -C386 -0.339636204128164 L376 -C386 -0.376444863255141 S375 -C386 -0.425519231422278