[Fri Aug 26 16:35:18 2016] >Input file: TMA4Z2N2M1D.pdb >TM segments: 262-277_ 295-310 MAIDEN score = -3.1867 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G303 -V308 0.660968720149051 A268 -T305 0.488514543299043 D304 -P309 0.462969841299684 A268 -V306 0.415571605120615 G276 -E298 0.327534747121768 G295 -A301 0.319800649762652 R270 -L275 0.284252652642834 R270 -A301 0.232652902417394 L275 -T305 0.214083010412608 G265 -T307 0.205807820073252 A268 -A301 0.188907116632681 R270 -A277 0.177056699240962 S269 -A301 0.163170824683901 A277 -G295 0.161654771985762 G276 -A301 0.153586444643015 R270 -T305 0.152454573042458 A272 -T305 0.150834226917926 E273 -F300 0.146027196383939 E273 -I299 0.136350096202508 R267 -T305 0.134529863025982 A264 -A310 0.131837711266363 A271 -A277 0.131465684483419 S269 -A277 0.115431446262516 V266 -V308 0.115278000076534 G265 -V308 0.107656349116251 A264 -S269 0.105745912756976 G265 -T305 0.104561635364692 S269 -A310 0.103147216267795 A271 -G276 0.101280789576444 V266 -G303 0.0960364933982256 G265 -P309 0.0938291334672849 E273 -G303 0.0913537102587947 F300 -T307 0.0817122034254298 G276 -G295 0.0816253994893958 W274 -I299 0.0764720620895367 E273 -T305 0.0690682759704018 I302 -A310 0.0657618780107463 E273 -E298 0.0652350942764829 A301 -V306 0.0641437727778715 R270 -T307 0.0625209913207847 A277 -H296 0.0619447369728174 R267 -V308 0.0617570937938199 A277 -E298 0.0604201812310299 E273 -I302 0.0551230140365462 S269 -W274 0.0544458279418671 G276 -H296 0.0532213221153945 R267 -P309 0.046496339624398 W274 -E298 0.0420186682698453 A271 -I302 0.0383583218312138 S269 -L275 0.0370640930947559 A268 -L275 0.0330409520693988 F300 -T305 0.0297714495823485 A277 -I299 0.0246337231688614 A268 -E273 0.0182408786166501 A277 -I302 0.0148133028327999 W274 -A301 0.013781596889487 R270 -G303 0.0122699449488732 A264 -P309 0.0121295149948706 A272 -A277 0.0117861338684622 E273 -V306 0.00897216820947921 A301 -P309 0.00771588221674757 V266 -T307 0.00687937811861694 S269 -T305 0.00470226551533415 I302 -P309 0.00220885582009434 A268 -I302 0.00171597725622696 L275 -G303 0.00121960554087863 I299 -V306 0.00079523503549872 L275 -E298 0.00047255167166238 A268 -A277 -0.00142508232851757 R267 -G303 -0.00193232748378924 G276 -P297 -0.00666922756438826 R270 -I302 -0.0078733090767682 A271 -G303 -0.00830133000567734 G265 -D304 -0.0083186889545907 V266 -A271 -0.010125642355864 I299 -T305 -0.0119840330617151 F300 -V308 -0.0125901909914514 L275 -G295 -0.0127068778068704 A277 -V306 -0.0133431822729388 S269 -I302 -0.0170881510552887 L275 -A301 -0.0180780918422321 A277 -T307 -0.0190865312934609 W274 -T305 -0.0218587322336496 R270 -G276 -0.0242535448980989 G276 -V306 -0.0267373355548495 A277 -P297 -0.0306441804745381 S269 -T307 -0.0318369116190354 A271 -D304 -0.0355443880655293 A271 -V306 -0.0377123222294156 G276 -T305 -0.0424969327832061 S269 -P309 -0.0426378754190946 A272 -A301 -0.0488791640229964 G265 -V306 -0.050759232199403 A301 -A310 -0.0539415505746366 S269 -D304 -0.0639006003160369 A268 -W274 -0.0668618569077102 A271 -A301 -0.0669230553762108 A263 -A310 -0.074427485558038 V266 -P309 -0.080807813136472 A277 -T305 -0.0855407463679669 L275 -I302 -0.0927427063646089 H296 -A301 -0.0929186532596171 A301 -T307 -0.0935779271011175 G295 -I302 -0.0970572582728413 V266 -V306 -0.100038185774966 S269 -V308 -0.10711526883593 A268 -V308 -0.107613852454302 W274 -I302 -0.109564138162539 G276 -I302 -0.110372884544988 V266 -A310 -0.110422847219811 V266 -D304 -0.115458919428175 R270 -D304 -0.117466653125749 R270 -F300 -0.12305494102221 E273 -D304 -0.128897707441766 R267 -T307 -0.134285646288632 S269 -G303 -0.144657237793466 W262 -R267 -0.14947641187421 G276 -F300 -0.150842232018646 L275 -F300 -0.151735360177573 L275 -P297 -0.153277297404828 R267 -V306 -0.153934224009715 R270 -V306 -0.157789898560805 A301 -V308 -0.162502247476625 A277 -A301 -0.164142469657516 A271 -T305 -0.165883715286646 A268 -P309 -0.173961978820025 L275 -D304 -0.178684396774516 R267 -I302 -0.183607720772196 A268 -G303 -0.183684903897131 G265 -A310 -0.184159563488048 A268 -A310 -0.184586404478068 W274 -F300 -0.186011535004682 G303 -P309 -0.189321749654925 T305 -A310 -0.193614188906155 E273 -A301 -0.194199005786303 L275 -V306 -0.197544002677857 R267 -D304 -0.21316275934567 I302 -T307 -0.216384783284258 A277 -F300 -0.220193650814384 G276 -I299 -0.227197118270377 L275 -H296 -0.239058093503338 G303 -A310 -0.239527258423929 R267 -A310 -0.249910995425935 V266 -T305 -0.265239253863427 G295 -F300 -0.265769461476673 A268 -T307 -0.279771441291836 D304 -A310 -0.280186374272563 I302 -V308 -0.281617982579712 S269 -V306 -0.35988614222695 L275 -I299 -0.363309039287656 F300 -V306 -0.374708050674254 A268 -D304 -0.588206367444806