[Mon Aug 29 16:52:20 2016] >Input file: TMA5FAV1M4G.pdb >TM segments: 472-511 MAIDEN score = -4.1929 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- S499 -I510 0.571033681101372 R485 -F490 0.474466712740834 K474 -P498 0.422479563339714 L480 -R485 0.414812114204002 Q484 -Y494 0.349378527825144 I502 -T507 0.345324122206391 K474 -I502 0.31738260833473 V478 -Y494 0.314547972998714 R485 -S493 0.308070465947242 V478 -P498 0.302097979078873 S493 -P498 0.281435013496226 K474 -S509 0.259605403752506 G483 -F490 0.247546112854302 K474 -M479 0.243692551110883 S482 -A489 0.242589649797086 G483 -P498 0.199402706743977 E475 -I510 0.190005363294839 V478 -I500 0.189262761951271 M479 -V495 0.187144238308664 G483 -Y494 0.18033610990496 E475 -P498 0.179312457982185 R476 -D511 0.178456837439794 L501 -S508 0.177532974749064 G483 -I488 0.177229657620158 G483 -S493 0.176925198332934 Y494 -S499 0.176627751995606 P498 -S508 0.17389551149415 D472 -L480 0.173269608577081 V478 -D511 0.171914173823418 N497 -T507 0.171649328803615 R485 -P498 0.166009662141506 R485 -Y494 0.165209676250892 I502 -I510 0.157111782325989 I500 -A506 0.156236082926626 K474 -S482 0.15494488420532 L501 -T507 0.150711707204839 V478 -I510 0.146312935800406 R476 -A506 0.146288314202179 K474 -L501 0.146208414908965 G477 -S499 0.145245612125815 V478 -S499 0.144290945311236 L480 -I510 0.140315444467111 S481 -F490 0.13871093742907 I500 -E505 0.136993862866681 Q484 -R492 0.133655869133052 V495 -D511 0.133213031165305 V478 -S509 0.133121862181297 A489 -Y494 0.131058668957991 M479 -Y494 0.130598446283354 E475 -N497 0.124264091276882 V473 -A506 0.123911010653854 V473 -I502 0.122893936825902 M479 -S493 0.120439659775798 V478 -L501 0.120235815188432 P498 -A506 0.119983206717542 G483 -V495 0.113676162144638 V478 -A506 0.11041125986284 S499 -T507 0.110017485938541 L487 -S493 0.107091638341138 V473 -S481 0.106218683718302 G477 -I500 0.105344519004863 V478 -T507 0.104420659723711 E475 -E505 0.103022644582616 K474 -D504 0.0993679943057546 M479 -S496 0.0975258996039905 R485 -R492 0.0973445394942242 A506 -D511 0.0971498864592033 V473 -L503 0.0947673935390552 R476 -P498 0.0924519104961723 Q484 -L491 0.0924202794138635 K474 -D511 0.0918134650109252 V495 -T507 0.0908531544792335 V478 -S496 0.0881328713849827 I502 -D511 0.0866185385563107 L503 -D511 0.0864419625307264 S496 -L501 0.0856840752343988 G477 -P498 0.0848217862891951 N497 -L503 0.0832607884093215 P498 -T507 0.0830045373324717 M479 -I500 0.0821490023913922 G477 -Q486 0.0806065593159145 I488 -Y494 0.0777080051592907 Q484 -V495 0.0776237449876955 N497 -I510 0.0743767304536576 P498 -D504 0.0735275545084253 V473 -I500 0.0735130613138153 E475 -A506 0.0713781780598 S493 -S499 0.0670160404565783 S481 -Y494 0.0656841213185109 L480 -I488 0.0642911838045293 D472 -S481 0.0614353863732455 V478 -N497 0.0565129035978869 R476 -L501 0.0565120223452018 R476 -S481 0.0550189668571988 L480 -A489 0.0528788532409319 S496 -D511 0.0528363010201323 S482 -D511 0.0520304064714204 S481 -N497 0.0519948978975302 E475 -G483 0.0515798793116611 V473 -G483 0.0513784383044863 S481 -S493 0.0497885817390986 S499 -S508 0.0476111016648852 M479 -T507 0.0452265833428963 M479 -I488 0.0448097240141507 G477 -A506 0.0439978116199127 G477 -V495 0.0412003355633441 S496 -T507 0.0406923726827344 S499 -E505 0.0368682604684354 E475 -L503 0.0290403882686856 D472 -S482 0.0288390704902549 G483 -L491 0.0272412822691313 N497 -D511 0.0241229271303149 E475 -D511 0.022114466977472 R476 -I500 0.0212228068749318 M479 -L501 0.0212049262757299 G477 -L501 0.0205173039707867 S496 -I502 0.0160322128014201 V478 -I502 0.0147122584961359 M479 -S499 0.0108256875039539 R476 -R485 0.00920104993888815 D472 -G477 0.00787578727983007 L503 -S508 0.00722498840180563 L480 -P498 0.00707224377882554 F490 -V495 0.00598729783218466 E475 -S481 0.00475226521705752 S482 -R492 0.00429385772986191 G477 -D511 0.00364493029701571 E475 -S499 0.003337918465254 N497 -S508 0.000230702859340237 S499 -A506 -0.000660236451803908 S481 -L501 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-0.0514889024722945 R476 -L503 -0.0516744643439944 S481 -I500 -0.0524516587745767 S499 -D511 -0.0532795427390689 R476 -I510 -0.0543336807304797 R485 -S496 -0.0546036004442674 E475 -S482 -0.0550320175216958 K474 -S508 -0.0563432463691598 R476 -Q484 -0.0591297330682941 K474 -N497 -0.0596584632279267 K474 -S499 -0.0615801331326365 L480 -S493 -0.0628712297771576 M479 -A506 -0.0635639113674974 Q484 -S493 -0.0636613960537327 I500 -S508 -0.0641342611826472 K474 -G483 -0.0650817568771429 Q486 -S493 -0.0668726909564148 N497 -D504 -0.0714645469595574 L501 -D511 -0.0721281544768204 S481 -A489 -0.0749820599814246 P498 -L503 -0.075028001500117 G483 -A489 -0.0751555778389004 V473 -P498 -0.075660112482918 R476 -S482 -0.0765077379770259 P498 -S509 -0.0776067882879001 E475 -S509 -0.0779632305950483 S481 -S496 -0.079262331028231 Y494 -I500 -0.0795833603434912 S482 -S496 -0.0804081204619485 Q486 -P498 -0.0808696429434557 R476 -S499 -0.0820034208196679 V495 -L501 -0.0821739746908188 V478 -S508 -0.0829060174242771 I500 -S509 -0.0887856563441178 E475 -S508 -0.0893091480661377 L501 -I510 -0.0930658895076927 G483 -I510 -0.0933544413581169 S481 -I510 -0.0937388578600853 L480 -S499 -0.0944967355603241 E475 -I500 -0.094691394562366 L501 -S509 -0.0949291012043698 S481 -R492 -0.095616185431568 E505 -D511 -0.0973754765164993 I500 -T507 -0.0974143192832644 S499 -D504 -0.097962144916005 I500 -D511 -0.098462563159087 M479 -L487 -0.100148842879282 E475 -L480 -0.103839380965271 V478 -L503 -0.104091351759858 V478 -S493 -0.104292170688989 M479 -D511 -0.104922311818293 V473 -S499 -0.105348938588017 V473 -S482 -0.106036692406349 D504 -S509 -0.108305847277613 V478 -L487 -0.110817744023757 E505 -I510 -0.114509925253675 E475 -D504 -0.116806112195731 Q484 -P498 -0.117861687741775 Q486 -Y494 -0.119197107942377 D472 -G483 -0.124642614617363 E475 -I502 -0.125178201873944 S481 -Q486 -0.127821941853004 G477 -G483 -0.129307515349123 K474 -I510 -0.129535369097439 Q486 -R492 -0.130004218459653 L487 -R492 -0.133129347869534 V473 -T507 -0.134158688238037 S499 -S509 -0.134892759246201 D472 -V478 -0.145586727511133 S482 -I488 -0.150736992192698 R485 -V495 -0.15082256165373 Q484 -F490 -0.151355896058038 M479 -P498 -0.157069354543708 G483 -R492 -0.158897550620022 D504 -I510 -0.159356624772484 S482 -L491 -0.161477020927869 E475 -T507 -0.162478491812207 V478 -R485 -0.16354133319449 I488 -S493 -0.163936268355481 L487 -Y494 -0.164747843650745 V473 -L480 -0.16724790863424 I502 -S509 -0.170320205211086 D504 -D511 -0.17127234993705 R476 -G483 -0.179002595254564 S482 -F490 -0.18019865332344 K474 -L503 -0.181009823924108 R485 -L491 -0.183310295451368 K474 -L480 -0.183662832529619 L480 -L487 -0.188143943237984 E475 -L501 -0.191178709720187 M479 -I502 -0.191229544868973 M479 -Q486 -0.193018482963074 D472 -M479 -0.197994601635104 L503 -S509 -0.201570134574454 K474 -I500 -0.206310998971398 V473 -L501 -0.212390532934918 I502 -S508 -0.213185533029707 S481 -L487 -0.213834797911672 G477 -N497 -0.220028096714249 V478 -G483 -0.220785049557882 Q484 -A489 -0.220979916867412 V478 -V495 -0.221055220097896 M479 -R485 -0.229194819967587 M479 -Q484 -0.240506288389335 S482 -V495 -0.240642433429363 S482 -P498 -0.243250934076706 L501 -A506 -0.244761739649777 S481 -V495 -0.256461076578561 N497 -I502 -0.258269784520827 G477 -S482 -0.27001213608765 P498 -I510 -0.277063172981583 V473 -V478 -0.290880047486853 S482 -Y494 -0.310196489203341 S481 -P498 -0.321193933054859 V473 -M479 -0.340000173280588 Q486 -L491 -0.3441998251208 L503 -I510 -0.34867688397802 S482 -L487 -0.355388477222671 K474 -A506 -0.3591633595214 P498 -D511 -0.389366569756016 M479 -I510 -0.40959478402258 V478 -Q484 -0.459622245326302 L480 -Q486 -0.499620907675205