[Fri Aug 26 16:44:27 2016] >Input file: TMA5KJK1M11D.pdb >TM segments: 386-442 MAIDEN score = 3.8877 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I415 -L421 1.25092491555294 T412 -Y424 1.21682958128339 L400 -I406 1.11268058794058 F401 -I406 1.06291624662497 D416 -L442 0.82933460705413 I415 -Y422 0.808315193424221 I415 -G423 0.67745609395487 D395 -L400 0.621922618279918 T411 -V425 0.619669137584816 L429 -R435 0.61011397931879 T411 -T426 0.608610586457123 F401 -S407 0.604141781356932 G427 -I433 0.511808475536132 Y413 -L421 0.503831392388818 L429 -M434 0.495133719716818 M414 -L421 0.446750982956885 M434 -K439 0.430233804864932 T426 -M434 0.372189311825991 M414 -V425 0.363012297567216 P410 -Q428 0.355348462509433 T412 -E431 0.35446713996297 R417 -L442 0.342847304347086 T411 -T430 0.325548666510388 M414 -Y424 0.321627576845516 T412 -Q428 0.29798527190128 M414 -G423 0.261393450775723 G427 -M434 0.257798701881079 I406 -T411 0.256870992086031 G398 -S407 0.25485169182355 Q428 -S436 0.254511957553013 M414 -R435 0.249339711359716 G398 -W403 0.246623139253897 D416 -T441 0.23770388528679 R417 -K439 0.234991968234426 D416 -Y424 0.234923670836404 L400 -G405 0.233802409542135 L421 -T441 0.233693346362359 P410 -T430 0.218038470448006 I415 -Y424 0.211013771386267 G405 -V425 0.205673836505679 L400 -T411 0.204524385015317 M414 -I437 0.200436326463128 N420 -T441 0.200275662257628 R435 -Q440 0.199899247165069 E402 -A408 0.197843676600428 Y404 -P410 0.196533873896086 P410 -L429 0.192564604168739 S407 -Y424 0.185242269882433 T412 -L421 0.184588957266289 E396 -Y404 0.18358701359141 F401 -Y424 0.183409348566956 T412 -T426 0.182912349754312 L400 -P410 0.179977678706688 Y424 -M434 0.177763378898222 D416 -R435 0.174414084117327 G405 -T412 0.170150670130693 A408 -G427 0.166821364246181 D416 -T426 0.161444785978816 T426 -D432 0.16101174419698 W403 -L421 0.159717539999118 G423 -Q440 0.147088456955142 D416 -V425 0.146230180088574 T426 -K439 0.143263434649793 G423 -Q428 0.140922031208826 Y404 -Y413 0.138960195605976 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