[Mon Aug 29 16:57:24 2016] >Input file: TMA5KJK1M2G.pdb >TM segments: 386-415 MAIDEN score = 0.6066 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L400 -I406 1.2145601565507 F401 -I406 0.963700455668698 F401 -S407 0.602943383810888 D395 -L400 0.457843993939516 I406 -T411 0.278529564835433 G398 -W403 0.261535469282768 L400 -G405 0.257900599551495 G398 -S407 0.222070136404986 L400 -T411 0.214890226256535 Y404 -P410 0.204027930903351 E396 -Y404 0.18191603055947 L400 -P410 0.180355619839271 Y404 -M414 0.153410695910289 G405 -T412 0.134417693870827 E396 -F401 0.133979755238078 N386 -P391 0.120565008519394 A408 -Y413 0.119122278952367 T397 -S407 0.113641199653997 G405 -T411 0.100320768364692 Y404 -I415 0.098803283523285 E396 -T411 0.0953433038530225 G405 -Y413 0.0933183728618445 L400 -I415 0.0894170038085249 T397 -G405 0.0872568530846714 E399 -T411 0.0863732745199144 E402 -A408 0.085257543238126 Y404 -Y413 0.0815732883059739 F401 -F409 0.0812225805833799 E402 -T411 0.0768763338243303 Y388 -M394 0.0690978687723908 Y388 -L393 0.0690628111462157 G405 -P410 0.0637650591536407 G398 -A408 0.0572114299168307 E396 -W403 0.0536392388398472 E399 -S407 0.0480626988837529 M394 -F409 0.0473793383013013 M394 -I406 0.0410948492608263 E396 -G405 0.0388143410561943 M394 -F401 0.0376392951390767 D395 -T412 0.0333806089318518 L400 -T412 0.0299439386880271 S407 -T412 0.0290077734896741 M394 -T411 0.0222161778019418 D395 -S407 0.0179175652532948 F409 -M414 0.0171881901127509 M394 -P410 0.0158189320510229 T397 -F409 0.0110964649388503 T397 -E402 0.010337368842797 N386 -V392 0.00939372925138349 L393 -T411 0.0015159402303675 G387 -L393 0.000991745943741407 G398 -Y404 -0.0251232478238079 G398 -F409 -0.0282581691292525 W403 -Y413 -0.0306173172828434 L400 -Y413 -0.0335543902991144 Y404 -T411 -0.0365726187874085 T397 -A408 -0.0393289691471808 D395 -P410 -0.0412805463290171 W403 -T411 -0.0433401810438664 E396 -I406 -0.0458691004651173 L400 -M414 -0.0491145345474493 D395 -Y404 -0.0492259584826154 Y404 -T412 -0.0497529656129183 E399 -Y413 -0.0548981894030409 E402 -F409 -0.0583191552834004 D395 -G405 -0.0610266075772405 F401 -T411 -0.0638004846029164 E396 -A408 -0.0640516882197821 L393 -T412 -0.0649155808407063 F401 -P410 -0.0657707523497555 S407 -Y413 -0.068146633601911 E396 -F409 -0.069363115870873 N386 -L393 -0.0733002076342921 L393 -P410 -0.0742271731647257 E402 -S407 -0.0759905929767424 D395 -E402 -0.0830578205674568 M394 -L400 -0.0852086582924338 F401 -Y413 -0.0871147431267674 D395 -F401 -0.0890396098536925 D395 -W403 -0.0910309495814841 E399 -A408 -0.0916769092302232 E396 -S407 -0.0934553194978207 E399 -G405 -0.0935283239987239 L393 -L400 -0.0941444754869671 W403 -A408 -0.0945040370578147 E396 -E402 -0.0958585183477183 F401 -T412 -0.100800490400633 T397 -Y404 -0.102563044352554 L400 -F409 -0.103928237045996 D395 -A408 -0.10644538907984 D395 -F409 -0.112655085409215 G398 -G405 -0.115027254756361 G387 -V392 -0.121317791047496 L393 -Y413 -0.126437833842353 D395 -T411 -0.130557228481432 T397 -I406 -0.13064410766604 F401 -A408 -0.130855241189199 E399 -I406 -0.13922108100945 M394 -T412 -0.140611362703799 Y404 -F409 -0.142179856517145 D395 -I406 -0.144091274546382 I406 -M414 -0.180359430482058 M394 -E399 -0.198392656973231 I406 -Y413 -0.233182736899792 I406 -T412 -0.25701426703469 G398 -I406 -0.266625355843846 L400 -A408 -0.275642724205756 T397 -W403 -0.281626498821842 D395 -Y413 -0.292682412762307 L400 -S407 -0.354162037165637 E399 -Y404 -0.45762438944619