[Fri Aug 26 16:46:56 2016] >Input file: TMA5KJK1M7D.pdb >TM segments: 400-430 MAIDEN score = 18.2914 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P410 -Q428 10 I415 -L421 6.5998881837682 T412 -Y424 0.811719564531831 M414 -L421 0.770470808857744 T411 -V425 0.705189390212145 P410 -L429 0.626564354224582 Y413 -T426 0.600467688549184 Y413 -L421 0.554348860989275 I415 -Y424 0.528765807153696 Y413 -G423 0.438320275451181 I415 -G423 0.389031918281577 D416 -Y424 0.367813842990558 F401 -I406 0.365703511359179 T412 -L429 0.34023260360683 I415 -Y422 0.318519980603922 G405 -G427 0.311509601833594 M414 -G423 0.310263554451608 T412 -T426 0.282383805022299 P410 -G427 0.267495525100541 S407 -G427 0.24977048095839 R417 -Y424 0.238911296716316 T412 -Q428 0.237484081438536 P410 -T426 0.234108095138391 S407 -Q428 0.224694078770217 T411 -L429 0.21519970256907 Y404 -G427 0.204396152281906 R417 -Y422 0.200872878675335 Y404 -N420 0.200317563578535 Y404 -Y424 0.186555126814325 M414 -V425 0.184643755842576 L421 -T426 0.181790134947907 P410 -Y424 0.171810530085138 T412 -G427 0.17130699435677 E402 -Y413 0.1634579640173 F409 -T426 0.156745850326923 Y404 -Y422 0.150350630906598 F401 -T412 0.146499451265579 P410 -T430 0.136917808359473 R417 -G423 0.132967740669855 G423 -T430 0.12621630946017 T412 -N420 0.119466254435158 Y404 -Y413 0.105951358498611 E402 -T411 0.100107328369334 G419 -Y424 0.0995196096673627 T412 -G419 0.0988785297384043 G405 -T412 0.0940972441804627 L400 -L421 0.0927636383628148 T411 -T430 0.0908633499909364 T411 -G423 0.0899728840663662 S407 -T412 0.0867000216544074 T411 -Y422 0.0857677618452255 S407 -T426 0.0852802601439908 A408 -L429 0.0818559795726459 G405 -Q428 0.0795366773239328 L400 -I415 0.0717971655137335 E402 -P410 0.0707211541947732 F409 -G427 0.0683848086010377 G405 -P410 0.0677215091276848 A408 -V425 0.0606257665393697 G405 -Y424 0.0602485397029984 L400 -M414 0.0565991110323878 F401 -Q428 0.0556066098982111 I406 -T412 0.053133970343257 F401 -M414 0.0479581108534782 T411 -T426 0.0440650485700513 I415 -N420 0.0389635548525629 L400 -G405 0.0374494926517039 W403 -T411 0.0369909609108001 L400 -T411 0.0347935784887534 L400 -T412 0.0315844130683747 T412 -V425 0.0295131372803326 F401 -T426 0.0285981959872004 W403 -G423 0.0187087763040243 D416 -T426 0.0185448269785469 D416 -L421 0.0176573931445017 M414 -G419 0.00983857695939094 G405 -G423 0.009187005338607 G423 -Q428 0.00895081072311843 Y413 -T430 0.00882343949922371 W403 -G419 0.00768963457796135 A408 -Y413 0.00742015967781473 M414 -T430 -0.000122067797458936 I415 -T426 -0.00168967619901395 F409 -V425 -0.00592168834571982 N420 -V425 -0.0071582126939993 M414 -G427 -0.00802723147934703 Y424 -L429 -0.00912621571705552 Y413 -Y422 -0.0109286726166697 A408 -T430 -0.0159750830646419 T411 -L421 -0.0189914805987534 W403 -A408 -0.0193634614045066 W403 -P410 -0.0216615043365909 G405 -L421 -0.0217619031275094 S407 -V425 -0.0287573455564165 W403 -T412 -0.0330286609609194 G423 -L429 -0.0334346836461572 Y404 -G423 -0.0390584975015225 W403 -M414 -0.0394587787307026 L421 -G427 -0.042031468779256 W403 -I415 -0.0431253005816954 F401 -P410 -0.0450981941816476 Y404 -V425 -0.0463911454413086 M414 -T426 -0.0466715814956719 Y413 -Q428 -0.0487076954887957 G405 -T426 -0.0521407701831067 F401 -G427 -0.052517329142766 Y404 -T426 -0.0525336471045375 T412 -Y422 -0.0542678471418947 M414 -Y422 -0.0557563426792935 Y404 -G419 -0.0573553229050181 F401 -S407 -0.0582036214359469 D418 -G423 -0.0607733320476078 Y404 -L421 -0.0650631352302944 I406 -Y413 -0.067545879765562 F401 -L421 -0.0689082489488069 L400 -S407 -0.0697015924214694 F409 -L429 -0.0712267328716374 Y413 -Y424 -0.0712531729863914 D418 -Y424 -0.0714560220121414 Y413 -G419 -0.0715826604430849 I415 -V425 -0.0739521824101921 W403 -Y413 -0.0750783237822064 I406 -T411 -0.0753434773288078 T411 -Y424 -0.0775008019165131 A408 -T426 -0.080788311010513 G419 -V425 -0.0812446157943985 Y404 -T412 -0.0814716401808167 Y404 -M414 -0.0821652138251636 L400 -Y413 -0.0840069074222449 M414 -N420 -0.0865474283384029 A408 -Q428 -0.0893014639045155 Y422 -G427 -0.0899572753044788 Y404 -T411 -0.0918125465059336 Y404 -P410 -0.0919880522650787 Y404 -Q428 -0.092765066256979 D416 -V425 -0.0964535673330742 F409 -T430 -0.100092065547132 I406 -G427 -0.10815342267868 L400 -A408 -0.114120225993502 F409 -Q428 -0.120373174055054 L400 -I406 -0.128321452299075 M414 -L429 -0.129201384477533 Y413 -L429 -0.131516816714539 Y424 -T430 -0.135172252226658 G405 -V425 -0.13929573776118 F401 -V425 -0.14054340173702 S407 -Y413 -0.140856662347861 T411 -G427 -0.1414494489021 F401 -I415 -0.14199675185026 G405 -Y413 -0.14588316806443 E402 -S407 -0.146604394575467 Y413 -G427 -0.147030910212269 L400 -P410 -0.150117085362708 Y413 -D418 -0.153216723376541 P410 -V425 -0.160496983527828 M414 -Q428 -0.162382308636432 L400 -F409 -0.164006353927647 F401 -Y413 -0.169288835180354 D416 -G423 -0.169780306193468 F401 -A408 -0.170518222073813 Y404 -F409 -0.179395291747662 V425 -T430 -0.182367968643488 W403 -V425 -0.185861546892825 G405 -M414 -0.186588929702679 W403 -F409 -0.198918235239702 Y404 -I415 -0.205765492383126 E402 -T412 -0.2161628101185 T411 -Q428 -0.217214927750305 W403 -N420 -0.218094057855544 T412 -G423 -0.233129621533712 G405 -T411 -0.23793463387794 A408 -G427 -0.240714021766997 T412 -T430 -0.249036163045675 F401 -F409 -0.252446771125824 T412 -L421 -0.260045976383419 F401 -T411 -0.261717376449799 E402 -A408 -0.27485622405684 W403 -L421 -0.307657874952196 Y413 -V425 -0.384363103130346 D416 -Y422 -0.385406848632919 E402 -F409 -0.389781374181511 M414 -Y424 -0.412568618238682 Y413 -N420 -0.496997709396483