[Fri Aug 26 17:10:38 2016] >Input file: TMA5U5X6S2D.pdb >TM segments: C310-324 MAIDEN score = -1.5245 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V311C-L316C 0.389930776711786 D313C-H319C 0.295324088071435 L318C-T323C 0.209442095708734 L316C-P322C 0.197506088172425 L316C-V321C 0.175651402570687 P317C-P322C 0.142566320770955 V311C-V321C 0.135125373455218 H319C-A324C 0.118151279164806 G312C-V321C 0.0943311809286158 I314C-S320C 0.0485975534579111 G312C-S320C 0.0459424435115086 D313C-S320C 0.0371436601053328 I314C-V321C 0.0289578657276826 V311C-H319C 0.0246082720384084 A315C-P322C 0.0081773838419934 L316C-T323C -0.000638400434262554 V311C-S320C -0.0261012687436675 V311C-P317C -0.0666563619173051 S310C-L318C -0.0853637654255657 S310C-P317C -0.131520128298578 G312C-H319C -0.151584907400673 S310C-L316C -0.190174913148344 V311C-L318C -0.199342174734619 D313C-V321C -0.20453056051362 A315C-S320C -0.227746447077243 G312C-P317C -0.239539262025828 P317C-T323C -0.268470974523858 G312C-L318C -0.271647188583731 D313C-L318C -0.29376801842374 I314C-H319C -0.360879170484528 A315C-V321C -0.365864687032952 S310C-A315C -0.392155694746966