[Mon Aug 29 17:22:06 2016] >Input file: TMA6BIX6M2G.pdb >TM segments: 86-101_ 414-431 MAIDEN score = -7.7881 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- R96 -L101 0.421348162239218 G420 -C427 0.361028310853816 D424 -P431 0.330816816119423 T421 -P431 0.262054165728244 G420 -P431 0.202110803256603 D89 -R96 0.194384390739077 R91 -H97 0.192651604195247 G420 -N425 0.181096187648544 W416 -N425 0.176659370067841 W416 -G429 0.165948052080235 T415 -G429 0.162723813479659 N425 -P431 0.153789334530744 T415 -N425 0.149731154129812 W416 -C427 0.14824317494064 S419 -C427 0.140414564220982 S92 -V100 0.134512812073825 I86 -R91 0.113431135377912 D89 -A94 0.110959923533734 I417 -G429 0.10838748884175 V422 -P431 0.0931022239664001 W416 -D424 0.0928270218565075 I417 -C427 0.0866870644743793 I417 -N425 0.0737006386268626 R423 -K430 0.0709237435798427 G420 -G429 0.0694580534577514 T415 -I426 0.0644259156975195 T415 -G420 0.0577235120386002 K418 -N425 0.0551029269024754 R91 -R96 0.0482610340742529 Q88 -R96 0.0476309717362087 T421 -K430 0.0411338952733302 I417 -F428 0.0318810547813899 T421 -F428 0.0280973382867913 Q93 -L101 0.0225595832032655 K418 -G429 0.0214463287926301 S419 -F428 0.00995163155664765 I417 -K430 0.00264760082104987 S92 -L101 -0.000806715402513081 T415 -C427 -0.00295656394073607 W416 -T421 -0.00651100531560322 T415 -F428 -0.0073488484245483 I417 -D424 -0.0230558588971519 A94 -Q99 -0.0234873018422763 S419 -I426 -0.0249786431731045 N425 -K430 -0.0250248890373528 I417 -V422 -0.0328861995497771 I426 -P431 -0.036318664821037 V422 -K430 -0.039460334353782 G420 -F428 -0.0397951553094043 I417 -I426 -0.0403069975311308 K418 -R423 -0.0413758388470287 T421 -G429 -0.0502496265846507 V87 -S92 -0.051017336313094 I86 -A94 -0.0523308082639264 D89 -I98 -0.0546903544802444 Q88 -Q93 -0.0592285470716281 K418 -D424 -0.0636720514062197 R91 -Q99 -0.0638368854103051 D424 -G429 -0.0644542197589741 I417 -P431 -0.078279665204307 I90 -Q99 -0.088199483545651 S419 -D424 -0.091367351169791 S419 -N425 -0.0971941118350065 Q93 -V100 -0.0992138297772458 W416 -F428 -0.101953858916485 W416 -V422 -0.103619021956592 D89 -I95 -0.115495126736141 I417 -R423 -0.129258799480644 R423 -F428 -0.129666474487744 A94 -L101 -0.133481033244432 T415 -V422 -0.141731827798304 K418 -P431 -0.151302952894516 I86 -I95 -0.152791887870945 V422 -G429 -0.162934612708808 D424 -K430 -0.174354844453172 R91 -V100 -0.177025628291418 W416 -R423 -0.181373819294745 W416 -I426 -0.183125166298501 K418 -F428 -0.183734531767326 Q93 -Q99 -0.189344363378843 Q93 -I98 -0.190007725525894 R91 -I98 -0.190510820764091 S92 -Q99 -0.190917827540322 R423 -G429 -0.191415007269111 V87 -A94 -0.196179363078651 I90 -H97 -0.196924511567479 G420 -I426 -0.207836006213857 S92 -I98 -0.210873099109211 T421 -I426 -0.213769529383492 V87 -I95 -0.219219060378278 I86 -Q93 -0.219438459793362 Q88 -A94 -0.222304822357105 K418 -C427 -0.253797594890699 I90 -I98 -0.253938945148832 Q88 -I95 -0.258683035219324 V87 -R96 -0.274119794881003 I90 -I95 -0.276191048331961 R423 -P431 -0.298159965123089 V422 -C427 -0.300390121281969 D89 -H97 -0.311052082594157 T421 -C427 -0.313190048011686 V422 -F428 -0.319834357864313 I90 -R96 -0.322281858450101 K418 -I426 -0.334797104249373 A94 -V100 -0.347353452986011 I86 -S92 -0.349633921770178 I95 -L101 -0.352418374090306 S92 -H97 -0.367104209019545 Q88 -H97 -0.417771279741237 V87 -Q93 -0.458846370245871 I95 -V100 -0.48778086607433