[Mon Aug 29 17:35:57 2016] >Input file: TMA6GR87M4G.pdb >TM segments: 86-95_ 120-140 MAIDEN score = -2.3694 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- Q130 -F136 0.684967918828563 N129 -L134 0.48636330712961 I94 -L123 0.469390751245121 K125 -Q131 0.422007867263667 I94 -T121 0.401085864833624 G120 -A126 0.32987775588958 A93 -G120 0.328936084450103 N129 -P135 0.31269386132255 G124 -G133 0.305677753713472 I94 -N129 0.30558374553417 L123 -N129 0.239447546481897 Q130 -P135 0.218456968940909 D95 -G124 0.205691162909945 D95 -G120 0.201963198013742 G128 -G133 0.201494016573829 V87 -L140 0.198463399390569 I94 -G132 0.173506084386457 G91 -L123 0.173099672613863 G124 -V138 0.163348235535423 G124 -G132 0.162581989104493 I94 -K125 0.162267960898793 G132 -T137 0.160695944746668 I92 -N129 0.160388196558138 I92 -I139 0.158258235111873 D95 -L123 0.151140887447765 A126 -G132 0.144469138739074 I92 -A126 0.139873128850002 K125 -G132 0.135585150994052 G91 -G124 0.132970402368867 A93 -A126 0.13189899989137 V87 -I139 0.130604879765245 I90 -L127 0.128568093849581 K125 -T137 0.122747852845225 K125 -F136 0.112569841609314 L127 -G132 0.110507048555285 I92 -G128 0.109745281410363 K125 -L134 0.109714767653807 T121 -G132 0.108063498076993 T121 -N129 0.105577539595756 E88 -T137 0.104649833686484 T121 -G128 0.100036158123259 I94 -G120 0.0972808815754753 K125 -Q130 0.096471288289149 D95 -L134 0.0960778445079991 G124 -T137 0.0960264017840571 E88 -L140 0.0948606717441558 A93 -G133 0.0943492203613409 L123 -Q130 0.0941533030704411 G91 -P135 0.0918385466729932 A93 -N129 0.0873595523768431 I90 -L134 0.078688426273366 L123 -V138 0.0786570763187551 E122 -N129 0.0729046617739826 N86 -I139 0.0712916386460309 D95 -F136 0.0668778446546461 L89 -I139 0.0665714089357828 I90 -L123 0.0644684841390748 G120 -G128 0.0632262078935841 A93 -G128 0.0619859748056255 L127 -F136 0.0618699118389658 I94 -T137 0.0608444355895106 E88 -V138 0.060653409576469 I90 -G124 0.0585654413974783 L123 -P135 0.0524792865255703 I92 -G124 0.0523134366614268 I94 -A126 0.0490110026288431 A126 -V138 0.0425412844763065 A126 -T137 0.0403962874198147 I92 -K125 0.0395590250099698 I90 -P135 0.0383364280346532 I94 -Q130 0.0375584418532993 D95 -N129 0.0371086953951385 L89 -F136 0.0349895520333234 G120 -N129 0.0330886789406972 G91 -I139 0.0307781582713273 T121 -F136 0.0286206223553656 G128 -P135 0.0286129519402798 L123 -F136 0.0276646165347545 G124 -P135 0.0273667252886503 G91 -L134 0.0267289597194069 A93 -F136 0.0153891535956383 L123 -G128 0.0148615650985562 G120 -L127 0.0141557286520513 G128 -T137 0.0134383469167234 Q130 -V138 0.013226118861325 I94 -G124 0.0120313862659778 I92 -V138 0.0105534362795137 A93 -G132 0.00170258693171377 T121 -L134 0.00158061749785821 L123 -T137 0.00142534201054278 D95 -P135 0.000971188376758914 L123 -G132 0.000428998447270401 I94 -Q131 -8.49445543482652e-05 L127 -G133 -0.000354844280015087 G91 -L127 -0.00208740462414525 A93 -T137 -0.00276479661402096 I92 -Q130 -0.00360457290527094 E122 -Q130 -0.00392942179076838 I92 -L123 -0.00503113821268864 V87 -T137 -0.00514390663549369 D95 -E122 -0.00939277947426254 A93 -V138 -0.0124831506521568 G91 -N129 -0.0125378525321445 L89 -P135 -0.0129220762559052 A93 -P135 -0.0165103585092883 G128 -L134 -0.0171074393778934 N129 -I139 -0.0188751429390541 T121 -Q130 -0.0192503622153244 Q131 -T137 -0.0194503083336098 D95 -G132 -0.0196878730111216 Q131 -V138 -0.0199579952236282 I94 -E122 -0.0245551172261358 D95 -L127 -0.0257512100312405 I94 -V138 -0.0263829733236034 I92 -E122 -0.0275703516219603 G124 -Q131 -0.0309993419931534 K125 -V138 -0.0315204645601526 D95 -A126 -0.0325057641886821 A126 -Q131 -0.0329732358252528 G91 -L140 -0.0332320214224956 A93 -L123 -0.0379147914498204 I90 -D95 -0.0384407904474153 N86 -L140 -0.0385891509273734 A93 -K125 -0.039108002174078 G124 -I139 -0.0453244716611585 G91 -T121 -0.0484676475549795 L123 -Q131 -0.0496997292403796 D95 -Q131 -0.0582053034394159 K125 -G133 -0.0610244982942039 A93 -L134 -0.0616520684175308 D95 -G128 -0.0623389852082807 N129 -T137 -0.0651473292291691 I92 -L134 -0.0655075579696414 A93 -Q131 -0.0682205484831004 L127 -L140 -0.0752892296727712 I92 -P135 -0.0765166308926348 D95 -Q130 -0.0803653534123143 A93 -Q130 -0.0815467513989141 I92 -Q131 -0.0861445342193461 V87 -V138 -0.0873831693159193 L123 -L134 -0.0875808173208199 I92 -L127 -0.0892136658143106 L127 -I139 -0.093407159222067 I90 -F136 -0.0937807929385532 I92 -L140 -0.0949443977317355 T121 -A126 -0.101303707286841 I92 -G133 -0.102738300806253 A93 -L127 -0.103206574236663 I94 -L134 -0.104055037887306 L127 -P135 -0.1063949880783 G124 -F136 -0.108693019617174 A126 -F136 -0.108700525406127 I92 -G120 -0.110900050838832 D95 -G133 -0.118716735055911 G124 -L134 -0.119191953899321 G91 -V138 -0.120028008582477 G128 -V138 -0.120032606843082 G128 -I139 -0.121565088103057 E122 -L127 -0.123943477441409 E122 -G128 -0.125778796104983 I94 -G133 -0.14260721590624 I90 -N129 -0.147742472181138 L127 -L134 -0.149807013347969 G91 -F136 -0.150083799194601 Q131 -F136 -0.151088798693831 Q130 -T137 -0.151530811220591 G120 -K125 -0.16180501495556 E88 -I139 -0.167477058813955 D95 -K125 -0.172468746936186 A93 -E122 -0.178489793584099 G91 -T137 -0.198416595100582 I90 -L140 -0.199071623376507 I92 -T121 -0.207538374011474 G128 -F136 -0.219631382174898 I92 -T137 -0.226214768396982 I94 -P135 -0.229185554574665 K125 -P135 -0.234014930471747 L89 -T137 -0.243302674213394 I94 -G128 -0.247694129179852 I92 -F136 -0.257342954371567 I94 -F136 -0.264747540392588 L89 -L140 -0.273004650025651 N129 -V138 -0.278887448255921 T121 -L127 -0.286838879242125 G124 -N129 -0.290129254778069 I90 -V138 -0.301039042750393 L127 -T137 -0.304335369056196 N129 -F136 -0.312671758258514 G124 -Q130 -0.314871868141918 A93 -T121 -0.347233338504943 I90 -T137 -0.361809336817031 I90 -I139 -0.377594598169618 L89 -V138 -0.403854705545354 A93 -G124 -0.405305618647533 I94 -L127 -0.412572090398327 L127 -V138 -0.429962517037675 D95 -T121 -0.468227845100019