[Mon Aug 29 17:36:23 2016] >Input file: TMA6GR87M7G.pdb >TM segments: 48-69 MAIDEN score = -0.3278 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- W61 -C68 1.33447417783256 W64 -V69 0.577094478541639 A50 -V56 0.43387378199502 N59 -P67 0.290474776421833 N59 -C65 0.23860772798756 G49 -V56 0.221014860163892 T63 -C68 0.210421876979884 F60 -C65 0.196048639617839 L58 -C68 0.153587742516264 A62 -C68 0.146068357101361 G49 -V57 0.0887219203075222 N59 -W64 0.0736822757973545 K52 -V57 0.0538033412183676 N59 -V69 0.0506352234015894 L48 -V55 0.0401346918921988 L51 -L58 0.0394061881506769 V57 -A62 0.0246878231907521 W61 -V69 0.0186678685482672 V57 -C68 0.0171166735476431 W61 -P67 0.0115736735034364 G49 -L58 0.000428998447270401 A50 -N59 -0.00736572240072486 L48 -V56 -0.0315446812397662 L58 -C65 -0.0425514078301474 F60 -P66 -0.0521463539910352 L51 -V57 -0.0559388643509511 L58 -T63 -0.0733332659581478 W61 -P66 -0.105528152004339 A50 -L58 -0.106215952310325 L58 -V69 -0.107658701022931 N59 -C68 -0.108781186296814 F60 -P67 -0.111220220653041 N59 -P66 -0.118625137509526 V57 -T63 -0.122494463781555 L58 -P67 -0.135266877655447 L51 -V56 -0.166077049116771 T63 -V69 -0.18361471008031 L48 -K54 -0.202624157164317 G49 -V55 -0.214244465239196 A62 -P67 -0.235923563410775 G49 -K54 -0.266977206240579 F60 -C68 -0.309909096342235 F60 -V69 -0.324933665317549 A50 -V55 -0.350297710946297 A50 -V57 -0.35318347911606 A62 -V69 -0.35482764733739 L48 -G53 -0.407016908744547