[Mon Aug 29 17:37:04 2016] >Input file: TMA6H6T2M1G.pdb >TM segments: 56-108 MAIDEN score = 43.9174 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L81 -L104 10 E84 -P108 9.32653281805608 R71 -L94 1.33101745928707 S82 -I106 1.30807804854235 S57 -L80 1.2988556613336 I83 -L107 1.29237065157221 T76 -L99 1.26059236318205 I83 -I106 1.20529747018366 V75 -L99 1.12260137069453 Y65 -A90 1.09618830486761 Q77 -L99 1.081516909907 L70 -L94 1.06880381681726 N58 -L80 1.03710903782691 L59 -E84 0.967696589634641 A61 -E84 0.954961038863824 L73 -L97 0.94680207540507 L59 -F87 0.908371801313097 E62 -A90 0.895088648999982 L56 -L80 0.888463651847461 V72 -E96 0.864698818900784 H69 -L91 0.834122395533817 L59 -I83 0.810651959748355 L67 -L91 0.794398180194162 H69 -L94 0.770523572430577 L56 -N78 0.763762495840739 S82 -L104 0.748863854505526 L81 -S103 0.743563888301387 P68 -L91 0.731508929634211 L70 -L91 0.717533052006332 L80 -L104 0.712234400694103 V72 -L94 0.708834478346018 F64 -A90 0.678157428635533 A63 -F87 0.649903785766714 F64 -A88 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