[Mon Aug 29 17:37:44 2016] >Input file: TMA6H6T2S5G.pdb >TM segments: C146-155_C169-178 MAIDEN score = 1.5708 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K155C-L171C 0.564925000431927 K155C-L170C 0.490340670844432 K155C-H169C 0.445687340496582 P150C-K155C 0.445323332714774 H169C-D174C 0.381020218301552 S152C-H169C 0.350853407084142 G154C-H169C 0.308692016541504 G154C-D174C 0.230652870725222 G154C-L173C 0.20222778501965 S152C-L173C 0.171892813923371 L149C-K155C 0.157859993746844 G154C-L171C 0.131036462380522 L153C-L170C 0.117681246994393 K155C-L173C 0.110543996477178 L173C-L178C 0.0982095826698881 G154C-R175C 0.0886870626345866 L149C-L170C 0.057378092281116 S152C-L171C 0.0265682077176606 S152C-D174C 0.0213444219770231 H169C-R175C 0.00843532347955978 H172C-L177C 0.00190538536119922 L153C-L171C -0.00566630965073722 L153C-L173C -0.00598873871863237 T151C-L170C -0.0342951227969834 S152C-H172C -0.0354147022196303 G154C-L170C -0.0378056205613857 P150C-L170C -0.0566591430345047 R147C-L153C -0.0626311132059747 G154C-E176C -0.0714439433927994 L170C-E176C -0.0752607107885601 I148C-L153C -0.0823615398828745 I148C-G154C -0.0844662281354935 L146C-T151C -0.084779333082142 L153C-D174C -0.0849355036287593 L171C-E176C -0.0871482450029295 K155C-D174C -0.0908833743720687 L153C-H172C -0.0949341500402463 L146C-L153C -0.101794489976639 L153C-H169C -0.110779307953204 T151C-H169C -0.113993906766558 K155C-H172C -0.148459582550616 L170C-R175C -0.152162662083374 K155C-R175C -0.173960332858925 L149C-G154C -0.221665753886914 G154C-H172C -0.258247042643509 P150C-H169C -0.277417787358813 S152C-L170C -0.287311342866293