[Mon Aug 29 17:46:10 2016] >Input file: TMA6NLU5S2G.pdb >TM segments: D37-91_D97-141 MAIDEN score = 69.7792 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- P48D-R111D 10 W65D-R128D 10 W65D-C127D 10 V101D-L112D 10 W66D-C127D 10 L68D-Y125D 2.76509152534453 Q64D-V129D 2.21459582256626 Y67D-C127D 2.02219796945034 W65D-P84D 1.39800489332187 M47D-L112D 1.36535028226389 V103D-H110D 1.32195653078521 I45D-L114D 1.23338964369923 C49D-R111D 1.18704989716418 I98D-L114D 1.179912856134 Q104D-H110D 1.15501788199806 F51D-I108D 1.14495326947828 V101D-R111D 1.11778387008822 W65D-V129D 1.04544880326337 K97D-A116D 1.03782871605968 K69D-L75D 1.00168369456762 V39D-I45D 0.981586636708777 V39D-D44D 0.979620979336687 I63D-V129D 0.954818997227893 R52D-I108D 0.913778775267035 R87D-V103D 0.896917793026384 E62D-D131D 0.885674017469539 E74D-L79D 0.858742312014218 V90D-V103D 0.850221099105658 R40D-V117D 0.835483568760022 W66D-L81D 0.835043769169249 W66D-V83D 0.825146806467826 I63D-Y132D 0.811573048786505 I63D-D134D 0.809806676631251 F51D-V129D 0.786083165078523 Q64D-H110D 0.784435441948624 E41D-A116D 0.761401360347095 Y67D-V83D 0.758806037134597 P48D-L112D 0.747662615598107 I63D-S130D 0.740047255163935 W65D-V83D 0.730907460730143 L68D-L81D 0.72309325692 P48D-H110D 0.712683827451362 T100D-L112D 0.70951339201892 C49D-S109D 0.70136036677795 C127D-E139D 0.700143128851842 K89D-V103D 0.698664112021743 E62D-V129D 0.685957601296376 I98D-L112D 0.661939718193548 S54D-I108D 0.645414820591257 W65D-L81D 0.638034908301636 K69D-L79D 0.637242933942398 L61D-Y132D 0.634886798667588 L68D-V124D 0.606030055501759 W66D-L112D 0.593864035071986 D134D-H140D 0.584118186091178 D131D-Q138D 0.561811738657386 I45D-V117D 0.551599903164891 W66D-Y125D 0.547858184477268 V103D-I108D 0.522709901906691 C49D-K141D 0.515577695627271 K69D-V124D 0.513054440512812 F51D-D107D 0.512054242186115 F51D-H110D 0.506897944942708 A50D-D107D 0.506835936594234 P84D-E126D 0.496342301918348 S99D-S115D 0.492605900917901 P71D-G123D 0.492070704965912 L68D-L79D 0.490813572953146 W66D-E126D 0.490282053881895 I63D-R128D 0.479839023672527 L68D-S82D 0.469562231068141 Q64D-Y125D 0.457554158859942 M47D-C127D 0.451213743410019 T57D-E62D 0.437282788693717 P48D-K141D 0.435917622751645 I63D-R87D 0.431739516818821 R87D-I108D 0.430054497379317 W65D-E126D 0.425576901284986 R52D-C127D 0.41826204505812 R73D-L79D 0.415508709423348 V83D-V101D 0.410907138936817 S99D-L112D 0.409517076523791 P71D-E126D 0.409451833162229 K69D-Q120D 0.408029572071706 A56D-D131D 0.404586170654548 E62D-C127D 0.400456782676997 Q120D-Y125D 0.396033353904858 V129D-D135D 0.393986068147427 K69D-E78D 0.391106241942951 P84D-K89D 0.38319978860204 L61D-R87D 0.379381998563826 L114D-D121D 0.376259531883939 L61D-D131D 0.362456943485141 W65D-S82D 0.361293533960287 T91D-S99D 0.359900692891794 L61D-A86D 0.359129849175688 I63D-P84D 0.358542811806239 G85D-Y132D 0.355517253207283 D43D-R113D 0.342850984031105 K69D-H77D 0.33815707451299 F51D-E126D 0.335673106096846 S109D-K141D 0.333363826223041 Q64D-K141D 0.330281977125419 A50D-S109D 0.329405045658647 P48D-S99D 0.32112558930986 S99D-H110D 0.317191230053153 K69D-H140D 0.31595732495843 E74D-C127D 0.315885013888457 C127D-H140D 0.315193337349882 S58D-K89D 0.313383895431705 E74D-A80D 0.312957806668477 S58D-A86D 0.312459088349796 C49D-E126D 0.311931057659791 E74D-G123D 0.309705319831153 Q64D-V83D 0.306234542856003 P48D-Q104D 0.306196305615027 S60D-A86D 0.305733176125083 G85D-S99D 0.300233321162901 G55D-H110D 0.300098075168417 R73D-Y125D 0.299942030013377 S99D-A116D 0.298986284699529 L68D-E122D 0.297545499118828 A53D-I108D 0.2956733197958 I63D-A86D 0.295269969648942 Y67D-L81D 0.289712070840752 C49D-V124D 0.288949250323178 P48D-Y67D 0.28705946296719 K89D-S99D 0.286881560617836 S60D-G85D 0.283302758149234 W65D-T100D 0.281950248394594 Y67D-R128D 0.280740450796915 R102D-H110D 0.280728972542896 Y67D-L79D 0.277347382063511 G85D-L112D 0.276166569873077 M47D-R128D 0.275936534325993 Y67D-R113D 0.274212448358249 P71D-V124D 0.273838711578045 P84D-Y132D 0.273298778222042 I45D-A116D 0.273091593349035 Y67D-H110D 0.269725984576545 Y59D-D131D 0.268683368268693 P48D-S109D 0.267356360053016 E70D-C127D 0.262322573884083 C49D-V83D 0.262053732629634 G85D-C127D 0.260278966315218 I63D-G85D 0.259607424321275 G55D-G85D 0.258647478958045 W65D-T91D 0.254762882046786 K97D-R118D 0.253975627811048 W65D-G85D 0.253411769456688 S54D-Q64D 0.251750419328394 T100D-L114D 0.250857446441284 V37D-C49D 0.250152008842845 L61D-S133D 0.249929177482327 G55D-R87D 0.248235916823942 V39D-V117D 0.247271322818158 R40D-D121D 0.246059497516737 V90D-G105D 0.245135981166529 P84D-H110D 0.24313341171711 K69D-E122D 0.242878111886078 H110D-H140D 0.242628206636923 P84D-L112D 0.241037924193679 C49D-T100D 0.23904933426688 D44D-V101D 0.237142304172229 W65D-V101D 0.236815790608936 P84D-T100D 0.236753081694459 W66D-V129D 0.234984910722445 H110D-Y125D 0.234686277751763 V90D-I108D 0.230811196003408 L68D-A80D 0.230091900195923 A53D-R87D 0.229987206568355 R111D-K141D 0.229440595070153 E62D-Q138D 0.228845652280327 F51D-S109D 0.228463089398069 S99D-S109D 0.226978817186985 I45D-C127D 0.21938329957959 P84D-Y125D 0.219103225367787 V37D-E46D 0.218117185043943 D135D-K141D 0.217905051215004 L81D-E126D 0.217285316477437 R128D-H140D 0.214421878070638 M47D-V83D 0.214357508493989 S109D-S130D 0.213002612177809 T38D-L119D 0.212307821797052 L79D-P84D 0.21114763022068 Y67D-E78D 0.210925170846846 W66D-K97D 0.210617133542907 P84D-S133D 0.210530688172376 R73D-E78D 0.210026198333636 D43D-L114D 0.209389982158591 C127D-Q138D 0.208372789647441 T91D-V103D 0.20641409397893 A53D-D107D 0.206142344602234 S99D-L114D 0.205177188259434 T91D-V101D 0.204273179070091 T91D-I108D 0.204065579677947 E46D-V101D 0.201786075131573 V117D-E122D 0.201737415079821 V103D-R113D 0.200295224101858 P48D-S115D 0.200157481114884 E62D-D134D 0.199921714874321 G105D-C127D 0.19965051065504 K89D-S109D 0.198831090637364 R87D-C127D 0.198692228852128 C49D-R87D 0.195744986864388 H77D-T137D 0.195543875349831 C127D-T137D 0.194238836915991 E126D-Q138D 0.194081956507441 S54D-A86D 0.193719636960929 A116D-E122D 0.192957151652758 V39D-S115D 0.191729071298349 V117D-Y125D 0.189090598593587 V124D-H140D 0.188843151688564 K69D-A80D 0.188697810589254 A86D-H110D 0.188017665673212 L68D-D121D 0.18778202383772 R87D-G105D 0.186009372523226 R40D-L119D 0.185478800492129 T57D-D131D 0.184373773146401 Y67D-E122D 0.18373094104007 W65D-R102D 0.182624164270828 M47D-H110D 0.182353446802722 P71D-L79D 0.18182335416109 S58D-Y132D 0.180721645280214 K89D-R111D 0.180240530776066 F51D-V103D 0.179707146374559 I63D-H140D 0.179490928922231 L75D-G123D 0.179416948138156 W66D-R102D 0.179383553022661 K69D-R128D 0.17844705357337 V37D-D44D 0.178319448275976 R73D-D121D 0.178101003933263 P48D-S82D 0.177993343165024 D44D-R102D 0.177832798556809 D131D-K141D 0.177809511970394 Y59D-G105D 0.177325266079265 S54D-Y59D 0.176627689704987 R87D-D134D 0.176514548935546 G42D-Q120D 0.1758748198767 P48D-L114D 0.175712489635142 P71D-D121D 0.174756603703454 S54D-Y132D 0.174049466158532 V101D-S115D 0.172152357426248 G42D-R118D 0.170633376529267 P48D-R128D 0.170587160918739 E78D-Y125D 0.170032675114574 R52D-R111D 0.169720503855471 D44D-R113D 0.168707954401638 A56D-S130D 0.168680333944101 P72D-H77D 0.168074873260414 S109D-R128D 0.167612343727264 A53D-D131D 0.167345623843716 T100D-A116D 0.166484085723204 G85D-S130D 0.165675107827989 A50D-R102D 0.165115499955253 R87D-V101D 0.164824875483671 V101D-V129D 0.164217673541128 A86D-Y132D 0.163928273485717 I98D-S115D 0.163622438701568 L68D-H140D 0.162280635060578 E70D-L79D 0.161511502152657 A53D-E62D 0.161476894718545 S58D-S130D 0.161142521070301 W65D-D136D 0.161080166985067 P48D-W65D 0.160738931430998 I63D-I108D 0.158770737224702 A56D-V129D 0.158630209622675 C49D-Q104D 0.158110972446791 W65D-D131D 0.157852157032072 G42D-K97D 0.156892217282088 D134D-K141D 0.155572999586431 R102D-L112D 0.153819236657046 R40D-S115D 0.153744553076024 G85D-Q104D 0.152815354245789 Y67D-E139D 0.152776932769844 V103D-L112D 0.152676297308938 P71D-L76D 0.1526053196073 Y67D-R111D 0.152274235808095 S82D-S115D 0.152114164144669 S54D-Q138D 0.151916523114623 W66D-T100D 0.151828593149848 T57D-I108D 0.151246456850522 L68D-G123D 0.150002656610764 Q64D-S130D 0.149602142896355 G55D-Q138D 0.149493298774047 T91D-K97D 0.149012301023184 A50D-R87D 0.148928985211368 A56D-K89D 0.146627454234425 P48D-C127D 0.146471705487949 A80D-H140D 0.146017363538735 E46D-E126D 0.144965992246187 R87D-Q104D 0.144924013738829 A80D-R128D 0.144200534362989 Y59D-R87D 0.144183406879931 E70D-E78D 0.143516662154058 P48D-G105D 0.143249503907608 W65D-D135D 0.142253253510035 W66D-R113D 0.14167057965462 E78D-E139D 0.141297470293768 G55D-Q104D 0.141225431552694 A53D-R128D 0.140631844118056 A86D-R128D 0.140540968243194 P84D-R111D 0.140027545652136 E62D-E139D 0.139944167300707 K97D-Q120D 0.139853554993023 T100D-S109D 0.138062610943154 I63D-T91D 0.137892117858138 Q64D-R113D 0.137373022328257 G85D-G105D 0.136454888753447 E70D-A80D 0.136388664289987 Y67D-D121D 0.136358912978 M47D-W65D 0.136272323615104 I63D-H110D 0.135987113790404 I108D-C127D 0.135836120034643 I45D-L112D 0.13562618989825 A56D-E62D 0.134896900065123 S54D-V103D 0.134855700131663 Y125D-K141D 0.134599225431729 R102D-D107D 0.13425371353595 R102D-S109D 0.13371820280497 W65D-R87D 0.13315552469932 H77D-Q138D 0.133124873561089 I63D-E126D 0.132997806943512 E74D-R128D 0.132396320516407 W66D-S130D 0.131552231899236 S82D-R113D 0.13140218205529 S54D-E139D 0.130806120448805 P72D-Y125D 0.130520397199189 A53D-H110D 0.130393704492406 H77D-S82D 0.130226051190646 G42D-R113D 0.128932456856975 L75D-V124D 0.128528889747869 P84D-D134D 0.128170065889943 A50D-I108D 0.125542294637531 R52D-E62D 0.125104417694863 A53D-S109D 0.124162459724426 T91D-N106D 0.123687825283779 S82D-D121D 0.123566220376304 C49D-G85D 0.123524695106433 S58D-D131D 0.123368011518745 P72D-A80D 0.123359035864515 V37D-M47D 0.123041196472372 S82D-Q120D 0.122845522942679 V83D-V124D 0.122678965604011 P72D-G123D 0.122336888045241 G85D-I108D 0.121431761979942 Y67D-G85D 0.121221809135822 Q64D-E126D 0.120728054442967 F51D-Q138D 0.120310739422651 S88D-S130D 0.120211607439454 H77D-V124D 0.119749021957723 A86D-S99D 0.119380278934641 S88D-H110D 0.118747325390524 C49D-L68D 0.118489642396984 Q64D-T100D 0.11822307534077 V90D-Q104D 0.117770352782982 G42D-D121D 0.117600294747771 C49D-S130D 0.117166195278484 P84D-S109D 0.116488267025215 E74D-E122D 0.116218710156826 W65D-Y125D 0.116099822039933 Y59D-S88D 0.116045134738872 K89D-D107D 0.113654698206613 P71D-H77D 0.11363368037967 V83D-K89D 0.113341227236013 H77D-V129D 0.113318376721155 Q104D-R111D 0.112691235055891 V101D-H110D 0.112521190158647 E46D-E122D 0.111995498402598 E62D-G105D 0.111142148397894 P72D-L79D 0.110457456125291 R87D-R102D 0.109932603723161 A50D-Q138D 0.108757823801878 F51D-E139D 0.108665586000072 P48D-V129D 0.108074823995465 W65D-S109D 0.107146158088389 A50D-G55D 0.106132620124483 W66D-V101D 0.105909501374528 L79D-V124D 0.105030824320387 E46D-R102D 0.104253289462336 E46D-D121D 0.104156710182182 A53D-S58D 0.104129689099175 A50D-W65D 0.103533112473179 S99D-C127D 0.103332984494327 R40D-I45D 0.103294005915734 L68D-P84D 0.10251694058868 A56D-G105D 0.102112585482161 G55D-K89D 0.101771658211289 A53D-N106D 0.101478247013517 E74D-Y125D 0.101331610307066 S82D-T100D 0.101268446221199 V39D-Q120D 0.101067083244132 C49D-Q64D 0.100912525709279 S130D-T137D 0.1005658413294 T38D-D121D 0.0998611201964277 R40D-E46D 0.0995660756731125 P48D-D107D 0.0994061906800341 A53D-S88D 0.099374901448235 L114D-Y125D 0.0991549498197291 I45D-V101D 0.0989870468068812 E74D-H140D 0.0983562288119231 K69D-L81D 0.0983371787850187 A50D-H140D 0.0973793012066348 C49D-S99D 0.0972561378664667 G42D-E122D 0.0970913091447789 G55D-S109D 0.0964213894621784 L68D-V101D 0.0955855524558085 E62D-S130D 0.0950430062563483 W65D-H77D 0.0944254016710263 R87D-Q138D 0.0934068340621956 H110D-R128D 0.093165604694974 Y67D-V124D 0.0931594405156737 A86D-V101D 0.0928503461715688 I63D-L79D 0.0928348412937797 S109D-E126D 0.0926648568128163 C49D-S54D 0.0918317422488165 E46D-T100D 0.0906381069011726 G85D-T100D 0.0905680340808524 H110D-E126D 0.0903804784123385 I63D-V101D 0.09001295378732 R113D-D121D 0.0890698947056712 S88D-R102D 0.0888350603006307 S115D-Y125D 0.0888252116433188 V83D-Y125D 0.0884539763212964 I63D-D136D 0.0872572491594136 P84D-R113D 0.086216699168602 R52D-S130D 0.0858384288347589 Q64D-R87D 0.0858373321629656 K89D-I108D 0.0850790261627723 E74D-L81D 0.0850670629147889 W66D-H77D 0.0848612268131261 S54D-H110D 0.0847961343574553 P84D-I98D 0.083689376654005 I63D-G105D 0.0831759392250238 T38D-R118D 0.0831399112959104 L76D-L81D 0.0829662941555691 G55D-V90D 0.0827788391644979 Y67D-L114D 0.0825758448863008 Y67D-L75D 0.0810796886031349 A50D-S130D 0.0804805599708089 S82D-L114D 0.0801865341406529 S60D-Y132D 0.0800134235307546 E62D-H110D 0.0795180433432789 T57D-Y132D 0.0794843690666478 C49D-S82D 0.0787585625465187 R128D-Q138D 0.078129707045838 S54D-S60D 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