[Mon Aug 29 17:50:39 2016] >Input file: TMA6TQ67M3G.pdb >TM segments: 329-337_ 352-357_ 360-367 MAIDEN score = 4.1757 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V337 -I352 1.81178465163422 K335 -F354 1.13493180366768 F334 -F354 1.09448653272421 I332 -R357 0.800227675947696 D329 -A356 0.763285633876539 F334 -I352 0.513156838743487 D329 -T355 0.503896207500346 F334 -S353 0.497035606237449 F334 -T355 0.446278362385897 I332 -A356 0.397133807732834 I332 -T355 0.373967730210523 L331 -T355 0.369052727907394 H336 -I352 0.319129220852984 E333 -A356 0.263637203174452 H336 -T355 0.192679462928029 V337 -S353 0.177495755303475 E333 -F354 0.164497640779752 E333 -S353 0.13995574015106 I332 -I352 0.139554862486726 G330 -R357 0.102670341944742 T355 -A363 0.0994702706666803 V337 -T355 0.0973567362862005 D329 -K335 0.0907783811613735 L331 -A356 0.0880174702401737 G330 -K335 0.0863376125943247 S353 -T362 0.0858497287724094 H336 -F354 0.0854335584603261 G330 -F354 0.0829945022159571 D329 -R357 0.0601406777696651 E333 -R357 0.0593934295342016 A356 -A363 0.057072745855848 L331 -I361 0.0562950673821012 I332 -V337 0.0505453018590147 V337 -A356 0.0419503226358025 A356 -I364 0.0336473006207756 G330 -S353 0.0335115135584314 I332 -I361 0.026915843019613 D329 -F354 0.0268091471915675 G330 -I361 0.014841344627571 D329 -S353 0.0107800704967967 L331 -T362 0.00339296228238006 I352 -I364 0.00218635058097227 I332 -T362 0.00117870595826108 L331 -F354 -0.00345707364499948 F334 -R357 -0.00546889453895416 E333 -K360 -0.00845623359381964 I352 -T362 -0.00979173939104561 E333 -I361 -0.0345967272477949 K335 -A356 -0.0371529169381397 T355 -I364 -0.0415596292063835 S353 -K360 -0.0480950760660357 G330 -T362 -0.0570768225568283 F354 -I361 -0.0600326155305553 I332 -F354 -0.061759958836566 F354 -A363 -0.0723731146464708 D329 -I361 -0.0750853404905798 S353 -I364 -0.0790784077820067 D329 -F334 -0.0828705752664201 F354 -I364 -0.083628747982544 L331 -S353 -0.0916021528261917 T355 -T362 -0.106311818407276 F354 -K360 -0.112049412966077 A356 -T362 -0.122328484275165 T355 -K360 -0.14023968399527 V337 -F354 -0.140402935324047 R357 -T362 -0.141413148537721 R357 -A363 -0.142153109328738 K335 -T355 -0.151053986790428 I332 -S353 -0.156212949558308 F334 -A356 -0.160127442724022 T355 -I361 -0.163412390882858 D329 -K360 -0.174868556452059 G330 -A356 -0.186874534735209 F334 -K360 -0.192925882319274 E333 -I352 -0.193310713355465 E333 -T362 -0.197006483307535 I332 -K360 -0.231277074748073 L331 -K360 -0.239434347588534 F354 -T362 -0.240153077754485 G330 -K360 -0.241459460235688 G330 -T355 -0.318126898699873 E333 -T355 -0.342864421329433 K335 -I352 -0.342908432389145 A356 -I361 -0.358737639311901 H336 -S353 -0.399976173511672 L331 -R357 -0.482198188397766 K335 -S353 -0.694123164132057