[Mon Aug 29 17:51:25 2016] >Input file: TMA6TQ67M5G.pdb >TM segments: 361-381_ 462-506 MAIDEN score = 7.1471 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I490 -D495 10 K475 -A483 0.922102456149997 D494 -A499 0.88646732140937 V376 -L484 0.718626651003277 I364 -K372 0.711205933738699 E489 -D505 0.710504098672854 E489 -D494 0.70418939074907 V376 -R486 0.665970052463484 I490 -F497 0.661089113434202 F497 -F502 0.658628018205725 K475 -I480 0.655932011171872 S373 -R486 0.643057943032654 E489 -F502 0.638031980079577 D494 -F502 0.566012425316442 D495 -F502 0.520246111685372 I379 -R482 0.519737533530595 I364 -R486 0.469755299650664 V376 -R381 0.46368864269875 P380 -L484 0.458459222288048 I490 -F502 0.445359260385792 I365 -K372 0.438886873344792 F497 -D505 0.422601611072548 V376 -V485 0.419322590627261 A363 -A483 0.368243258359644 R487 -L492 0.342450011654894 P488 -S498 0.337628441873916 T368 -L492 0.335687104121866 T468 -T504 0.314021009365265 L470 -K475 0.302764156999303 K475 -R482 0.302272426245994 G472 -S479 0.295382736673045 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