[Mon Aug 29 17:55:12 2016] >Input file: TMA6ZPK8S1G.pdb >TM segments: C504-535 MAIDEN score = 1.2750 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- C512C-K517C 0.505565222093987 K508C-G515C 0.499092034280126 K508C-N514C 0.433623861612144 Y510C-G515C 0.346881642191919 K509C-G515C 0.336940945128282 N514C-R521C 0.334191645053651 T504C-E525C 0.317649025836023 K509C-N514C 0.291355062991759 K505C-S519C 0.282053843254433 Y510C-K517C 0.244462989556042 V507C-G515C 0.211980336696164 V507C-S519C 0.210100652812085 K508C-R521C 0.200112103416349 M520C-G526C 0.179052887248305 T504C-P527C 0.142618388426777 G515C-R521C 0.130476502350252 L522C-P527C 0.120673819437458 C513C-M520C 0.120017299915677 L506C-P527C 0.118920281033386 L506C-S519C 0.107715860246039 L506C-G515C 0.104139052426383 T504C-G526C 0.0979250264291892 T504C-M520C 0.0875994536956655 P527C-S532C 0.0808564770913573 M520C-E525C 0.0788515307473046 L506C-M520C 0.0787752238050716 N514C-S519C 0.0754090215024368 L506C-E525C 0.0706286802423652 Y510C-M520C 0.0700071109548878 L506C-G526C 0.0635613301747409 K505C-E525C 0.0630789985044848 R521C-P527C 0.0612971337165302 T504C-Y528C 0.0589512440116948 V507C-M520C 0.0583493855555206 C512C-S519C 0.0532675761020798 V511C-S519C 0.0477738794667855 C512C-A518C 0.0474787364635298 G529C-V534C 0.0454234592362381 V507C-R521C 0.0450138877569801 V507C-G516C 0.0377929116958136 T504C-L522C 0.0351163910115071 K505C-P527C 0.0312785911863216 K509C-S519C 0.0161273558039188 V507C-A518C 0.0158835122137031 K505C-Y528C 0.0122997339899422 S530C-N535C 0.00943705393022776 G526C-S531C 0.00779374207498762 T504C-A523C 0.00708513295451985 K508C-C513C -0.00618817498144431 K505C-G526C -0.00716693936246671 V511C-G516C -0.0112381491868614 V507C-K517C -0.0142263195884338 V511C-A518C -0.0175224132490839 M520C-P527C -0.0209094932799403 T504C-I524C -0.0248607441247155 K508C-G516C -0.0357857901140048 T504C-S519C -0.0393511389262537 L506C-A518C -0.0398810827236256 S519C-I524C -0.0459151373813089 K509C-K517C -0.04817493924637 R521C-G526C -0.0633188538667846 T504C-R521C -0.0696301202299008 K505C-L522C -0.0717592688404354 V507C-P527C -0.074691664137716 R521C-Y528C -0.0750411150918446 K505C-R521C -0.0807981843176488 K509C-A518C -0.100590863461862 A523C-Y528C -0.100814100615076 S519C-E525C -0.101000420197007 L506C-Y528C -0.102326040591151 G515C-M520C -0.103118611563059 Y510C-A518C -0.104019602759743 V507C-N514C -0.105583568356413 K508C-S519C -0.105983715100113 K509C-M520C -0.107882990064618 N514C-L522C -0.11840140676013 N514C-M520C -0.124327155124551 L506C-L522C -0.159624965504044 K505C-M520C -0.161403431119401 K508C-M520C -0.165958071588486 L522C-Y528C -0.189366884746449 K508C-K517C -0.1981614671026 L506C-R521C -0.199369597590337 V511C-K517C -0.202666909735303 C513C-A518C -0.214210687318334 C513C-S519C -0.234018789221527 K509C-G516C -0.277293629778271 Y510C-S519C -0.310551010238123 K508C-A518C -0.357655222044654 Y510C-G516C -0.728880054897544