[Mon Aug 29 17:56:03 2016] >Input file: TMA7A386M1G.pdb >TM segments: 405-417_ 524-536 MAIDEN score = -2.1778 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V413 -I528 0.933157332911922 V413 -D530 0.820874150107921 V413 -L529 0.378739644595593 K409 -E531 0.369354932668332 M417 -I528 0.348230302832409 K409 -A532 0.29928441807342 T410 -D530 0.238419595951627 V413 -I526 0.225410973459421 D530 -V536 0.216190415817216 M412 -L527 0.191773126366103 T405 -T533 0.190017917438126 V413 -A532 0.156010955653531 T410 -L529 0.152838802112301 G406 -M412 0.145311059693829 T410 -T533 0.134509491236142 G408 -L416 0.132529588355998 N414 -D530 0.127470549128433 N414 -E531 0.1247137689698 T405 -T410 0.115221827957301 A407 -E531 0.114652932547505 G406 -V413 0.113327605481675 M417 -A524 0.10411782917773 G408 -E531 0.0990527338477114 N414 -I528 0.0971829601188641 L415 -L527 0.0943936606542093 L415 -L529 0.0929308861639893 D530 -S535 0.0909606993353029 V413 -E531 0.0848543377469584 T410 -S534 0.0833020459221701 M412 -L529 0.0824473210338574 K409 -D530 0.0746724561628278 L529 -S534 0.0716172635630765 G408 -D530 0.0693292994645605 G406 -E531 0.0669983079422463 L415 -I526 0.0527927762626867 L416 -A524 0.0491359404773424 T405 -M412 0.0469027328981859 K409 -T533 0.0428010040447463 A407 -D530 0.0401307816922314 A524 -L529 0.038273949944835 T405 -S535 0.0366692514208689 T405 -D530 0.0356873808831271 L416 -D530 0.0329886632636134 G408 -L529 0.0304081988083365 T405 -A532 0.0254760680569674 V413 -A524 0.0228482116186735 L416 -P525 0.0224870425016555 L529 -V536 0.0220672304791845 A407 -N414 0.0214907876628772 L527 -A532 0.0140380471186958 T405 -S534 0.0131425209297902 K409 -S534 0.00786241229030127 A407 -V413 0.005158649506805 L416 -L529 0.00412671019866284 N414 -A532 6.91664848151419e-06 T405 -L529 -0.000674110406971407 I528 -T533 -0.00584306466170403 G406 -N414 -0.0117527912133015 M412 -D530 -0.0306453098287087 G406 -S534 -0.0346028830113001 L527 -T533 -0.0355560320305979 T410 -A532 -0.0374483561761387 M417 -P525 -0.0397697643434194 G408 -N414 -0.041988944916864 T410 -E531 -0.0503325751155357 K409 -N414 -0.0515244048777035 N414 -I526 -0.0529127487834806 L415 -D530 -0.0565230337619513 T410 -L527 -0.0587104042131372 T411 -M417 -0.0593588482033178 G408 -V413 -0.0598605711346014 M417 -L527 -0.0652528675959232 T411 -E531 -0.0665219136963531 N414 -L527 -0.066700894975307 V413 -P525 -0.0728198307279604 I528 -S534 -0.0762815267993258 T405 -V413 -0.0788445321892026 G408 -I528 -0.107045239677384 M417 -D530 -0.110476929846274 G406 -D530 -0.116104889139873 K409 -L415 -0.117968944108871 T411 -L529 -0.122891345443166 L415 -I528 -0.123388571730718 A407 -M412 -0.136451331652108 A407 -L415 -0.147019432480111 K409 -M417 -0.14993918423989 M412 -I526 -0.157004305320092 L529 -S535 -0.158327796794387 K409 -L527 -0.162114326808795 T411 -I528 -0.172458274066075 G408 -L415 -0.175062180746822 K409 -L416 -0.1776539854594 N414 -L529 -0.186038935762651 L416 -I528 -0.187648810739702 T405 -E531 -0.19193191803114 T411 -L416 -0.196057160394861 M412 -E531 -0.197772747529503 M417 -I526 -0.215389157693519 G408 -M417 -0.223391349844722 T410 -L415 -0.223775629408443 T411 -D530 -0.224949208046803 L416 -L527 -0.225880773276339 T410 -L416 -0.228824202251277 K409 -L529 -0.229971240636082 G406 -T411 -0.231888135774224 K409 -I528 -0.265696687916281 M417 -L529 -0.292471213137583 T410 -M417 -0.314507978955925 E531 -V536 -0.322042489384241 M412 -M417 -0.322782742049895 T405 -T411 -0.358559643040566 L416 -I526 -0.374989281225438 V413 -L527 -0.385471749110843 T410 -I528 -0.392133030497592 M412 -I528 -0.402198457892061