[Mon Aug 29 17:56:56 2016] >Input file: TMA7A386M5G.pdb >TM segments: 266-313 MAIDEN score = -8.8118 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L272 -M306 1.76371264648228 L272 -I309 1.15517474864116 N274 -M306 1.03476806316277 P271 -R310 0.824384316755919 N278 -I302 0.817840051164782 V282 -E298 0.722627950466693 Y281 -I302 0.685389057850243 G277 -V303 0.677523090504019 N278 -F299 0.630782671370686 N278 -V303 0.541677438945226 D294 -F299 0.514764226673186 I276 -M306 0.500218156369635 P271 -G277 0.434151300898184 L272 -Y308 0.426409524838294 F275 -I302 0.419994689713214 M273 -I302 0.41694925618595 L272 -M307 0.4032925931957 Y281 -V301 0.377590959821896 C285 -K296 0.376241265755342 V282 -M293 0.320128229768603 G277 -F305 0.318005616664506 P271 -M306 0.315398795989676 N278 -K296 0.308370153999858 G288 -G295 0.293304053932955 P271 -Y281 0.279308907350778 N274 -F305 0.272343386035468 P271 -I309 0.270719110285143 N278 -V301 0.262312267294135 G277 -M306 0.260407773326448 A290 -G295 0.24674261504308 L272 -T313 0.242127831549689 P271 -I276 0.240118388570011 L272 -G277 0.238656631491621 M270 -I276 0.229183220044097 D294 -G300 0.225832979599571 Y281 -E298 0.217383919788271 E298 -V303 0.214786508114252 M270 -V303 0.214283463059283 S266 -P271 0.204273152730098 M270 -L311 0.198835006918709 P271 -T313 0.19578100875697 P271 -L311 0.193989638859379 M269 -R310 0.193158626595427 Y281 -A304 0.188245110113328 C285 -I302 0.182712635730608 C285 -L291 0.181295927874344 L272 -V303 0.17935697259981 M273 -G300 0.173629274498937 V284 -E298 0.172518118863725 A292 -F299 0.170146310628877 G280 -F299 0.168016938305535 M273 -F305 0.166364912120521 G280 -E298 0.163058551356277 G280 -A290 0.162747451073397 V282 -V287 0.153008774912626 G267 -M273 0.149013030594839 I276 -E298 0.146831312944697 Y281 -Y308 0.144804901843192 V283 -E298 0.144581448462507 M273 -G280 0.139929752580335 M273 -M306 0.138809634904326 F279 -V303 0.138184336850578 V283 -V301 0.137965599321896 M273 -V301 0.13724712807442 I276 -I309 0.133636768091726 I276 -C285 0.13287865874933 N274 -E298 0.132007181996132 G277 -I309 0.130850017140252 D294 -V301 0.130042384983348 C285 -A290 0.129220366016089 F279 -V301 0.128254210256071 N278 -I297 0.126906084432306 A290 -E298 0.1265684064353 M270 -Y281 0.124328209478128 G277 -I302 0.122529131346863 Y281 -A289 0.12214535442105 L272 -F305 0.121684293495601 F275 -G300 0.12041633645158 G300 -Y308 0.118281617949419 M293 -E298 0.117603398004325 Y281 -A290 0.11687874846605 V284 -I302 0.116749595930527 G280 -I309 0.116656007232657 V282 -I297 0.116577494887467 F279 -F305 0.115972363462994 N274 -I302 0.11263777075412 G277 -F299 0.108718829519344 M270 -Y308 0.108362799930966 F275 -F299 0.106381859451914 G280 -A304 0.106354624010574 F279 -G295 0.103327462810298 V301 -T313 0.103045166462572 P271 -A304 0.102526684394901 I276 -G300 0.101555459510074 G277 -I297 0.0981835092566449 K296 -A304 0.0981819081138386 V286 -D294 0.0961471560751841 N278 -R310 0.0938490237281431 V282 -A292 0.092499341123454 C285 -I297 0.0909587552417817 L272 -F312 0.0897264176486972 G280 -G300 0.0869617186735079 Y281 -V287 0.0859870307643462 V283 -G295 0.0856020342218363 P271 -I302 0.082933858086724 G280 -G295 0.080779338591437 L268 -F275 0.0800639729799197 P271 -G280 0.0784440587980391 G280 -V287 0.0770192789340483 L268 -R310 0.0770027162644131 I276 -Y308 0.0767075043873633 L272 -V301 0.0751619728880166 M273 -E298 0.074576654420109 G277 -G295 0.0727903255404487 F275 -A304 0.0719934946274874 N274 -Y308 0.0719161394444603 L272 -Y281 0.0698003671108953 Y281 -M307 0.0696177811838264 V284 -A289 0.0687632156687195 M293 -G300 0.0682690577736849 M269 -I309 0.0675259061269324 V301 -I309 0.0650425782219077 C285 -F299 0.0641720015435183 M269 -G280 0.0623966541335426 A290 -F299 0.0607619932180201 M269 -M306 0.0588239990312391 N278 -D294 0.0588122913315408 F275 -E298 0.057931180916249 F279 -G300 0.0567724890373178 G295 -A304 0.0561392682735262 L272 -G280 0.0534182623690027 I302 -T313 0.0530675918091826 L268 -M306 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