[Fri Aug 26 18:10:30 2016] >Input file: TMA7U539M1D.pdb >TM segments: 107-118 MAIDEN score = -2.1538 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V109 -I114 1.02156032154659 D113 -A118 0.267678073754042 V107 -D113 0.26688728573567 S110 -A118 0.0901955791515849 E112 -A117 0.0789284804429595 D108 -A117 0.0229147229740687 V109 -A118 -0.0011076827946499 V107 -A117 -0.00946602999129231 V107 -E112 -0.0647231002975932 D108 -I114 -0.0694905110894064 D108 -L115 -0.0857300344887424 V107 -L115 -0.110132008871489 E112 -A118 -0.140078081435393 S110 -A117 -0.16560922814201 V107 -I114 -0.191500591565127 D108 -D113 -0.205397113766275 D108 -V116 -0.20797482488502 L111 -A118 -0.251984635225146 V109 -V116 -0.289272032799354 S110 -L115 -0.29160707366817 L111 -A117 -0.304715280052216 V109 -A117 -0.337496832338527 S110 -V116 -0.359836337170879 V109 -L115 -0.368551483121641 L111 -V116 -0.447267761061714