[Mon Aug 29 18:07:51 2016] >Input file: TMA8NNC1M1G.pdb >TM segments: 587-604 MAIDEN score = -1.4772 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- A590 -A598 0.356345006472991 A596 -G604 0.329355868870306 L591 -V599 0.321177140149921 A590 -I595 0.319836183408193 A594 -S600 0.305604067683071 K597 -P603 0.298524803990208 L591 -P603 0.224464186017365 K589 -I595 0.185643438399697 I587 -A594 0.182180306838262 V599 -G604 0.178083569063121 L591 -G602 0.133924655771641 I587 -D592 0.128439967297887 K589 -V599 0.125411302603617 L591 -K597 0.111372973619951 A594 -L601 0.094214340425499 I595 -S600 0.0632310187249523 I587 -V599 0.0615159486829571 L591 -A596 0.0532934611356275 G588 -S600 0.0488374727548222 L591 -L601 0.0398118542745731 I595 -P603 0.0332611747240499 I595 -G604 0.0240631227791788 K589 -K597 0.0231474452062588 I587 -A596 0.00556134764399629 A590 -V599 -0.00203521968419018 S593 -L601 -0.0030414862943422 K597 -G604 -0.018733330028293 G588 -K597 -0.0276052914723866 D592 -S600 -0.0292201034836513 K589 -A596 -0.030411367199513 G588 -A594 -0.0306719927279593 D592 -G602 -0.0343585215789504 D592 -P603 -0.0381804662206888 A590 -S600 -0.0383516948133975 A594 -G602 -0.0417913957199616 D592 -A598 -0.0461653284461025 S593 -S600 -0.0465771494772396 G588 -V599 -0.0550671427651057 A596 -L601 -0.0575130706701419 S593 -A598 -0.0591370245688259 G588 -A598 -0.0608318679271032 L591 -A598 -0.0609998821831681 K589 -A594 -0.0727819089130368 D592 -K597 -0.0833265966938921 G588 -A596 -0.0865449909576892 D592 -L601 -0.0870809605301731 A590 -K597 -0.0872546992117522 S593 -V599 -0.0991711269042419 D592 -V599 -0.115392421474118 K589 -A598 -0.137305831946096 I587 -A598 -0.149798233881126 A596 -P603 -0.175570845549388 A594 -V599 -0.182738360544663 L591 -S600 -0.187577988319668 I595 -G602 -0.190748975557511 K597 -G602 -0.224594865071829 A598 -P603 -0.225620212570988 G588 -S593 -0.227466062775064 G588 -I595 -0.230324873373544 A598 -G604 -0.254991507306814 A596 -G602 -0.265724925616274 I595 -L601 -0.311183405789823 I587 -S593 -0.32477003401261 I587 -I595 -0.3580361701724 A590 -A596 -0.365804941607325