[Mon Aug 29 18:11:02 2016] >Input file: TMA9DK60M1G.pdb >TM segments: 311-354 MAIDEN score = 2.6286 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V318 -L341 1.3467288573266 I317 -L341 1.10459483302684 I317 -I345 1.06882077374115 D322 -L341 0.845953338554685 D322 -L340 0.833565206496617 L327 -E332 0.803870653043181 V320 -E325 0.64288894700936 V318 -I323 0.58004696024795 I323 -F328 0.568919094318957 D322 -F328 0.519908930226281 L327 -L340 0.505935507223377 F328 -D333 0.482768431165549 I323 -L340 0.479506789397828 D322 -L327 0.479454471168008 V318 -V337 0.372832922189224 S315 -I345 0.3390969010362 D322 -V337 0.326562441176074 G313 -E347 0.313209545428334 T319 -T338 0.309831136242597 T314 -E342 0.303307155353507 D322 -E342 0.299782808064654 E321 -L327 0.293610494818337 V318 -L340 0.261021421880361 E326 -L340 0.258755567286535 G316 -K343 0.251541594028591 D322 -D333 0.248637574637529 T314 -L341 0.242089911638739 L327 -D333 0.241730707901643 D322 -G329 0.223912116582296 G316 -R344 0.214449454302693 V318 -E342 0.204292574398098 D322 -D336 0.19555713412351 I323 -G329 0.195437967785474 E326 -H335 0.185823821409624 Y311 -G316 0.18066868425371 G316 -L341 0.172651563929312 G313 -Y348 0.167595414796055 G316 -Y348 0.166808115489751 V324 -G329 0.16097585031407 E321 -G329 0.154601363559659 E326 -E334 0.149596893948104 D322 -T338 0.147430669299073 L341 -S346 0.146721808155234 I317 -V337 0.144773289740367 V318 -E325 0.142248661549278 G313 -K343 0.142141483856177 E347 -S353 0.141724655050554 I317 -Y348 0.141113970873691 H335 -L341 0.139732358118263 V324 -V337 0.139345668206869 E347 -A354 0.138800643493693 T314 -T319 0.12945671132689 I323 -H335 0.129124129312832 T338 -I345 0.127484336848281 V320 -L340 0.127474978477709 V324 -D333 0.122044188572961 G313 -Y350 0.121379764725114 E342 -E347 0.121113432633393 V318 -S346 0.116829370821194 E321 -E326 0.116085733137641 G312 -I317 0.113871120779264 V318 -D336 0.108738529463309 E325 -E339 0.10594319598442 E326 -D333 0.103862090731291 V320 -G329 0.102738017428063 V318 -K343 0.102158478107579 I317 -D322 0.100830156264784 S346 -A354 0.100828502770632 T319 -E334 0.0990246919387432 E330 -H335 0.0975708463947714 D336 -K343 0.0940242674224614 I317 -L327 0.0930305061479508 T319 -S346 0.0919102950799235 L327 -E339 0.0889499933436061 E325 -E332 0.0867456994065186 E325 -E334 0.0859608328619126 E325 -E342 0.0858462299564351 D333 -E339 0.0856029867378143 I323 -I345 0.0842597078913996 G316 -I323 0.0830333874757549 I331 -L341 0.082003688652418 V318 -I345 0.0795764680670352 G313 -R344 0.0794248722646733 E332 -E339 0.0736757350733057 F328 -L341 0.0716320300614304 E334 -L341 0.0700230559780444 T319 -R344 0.0688937920189122 K343 -Y348 0.0681685692583001 I317 -L340 0.0672520378346927 T338 -R344 0.0671775447054405 E321 -E330 0.065629638188517 V324 -E332 0.0654399066003091 V320 -F328 0.0647648845308222 E347 -F352 0.0634357822833171 D322 -K343 0.0610654948854554 I317 -S346 0.0606053966488567 G329 -H335 0.0589650591679836 G329 -E334 0.0589246939611863 T319 -V337 0.057819987881917 I317 -K343 0.0576139211043873 S315 -E347 0.0552549882076003 I317 -E342 0.0552202703568359 T314 -E349 0.0515774334957362 S315 -L340 0.0481155255079 D322 -S346 0.0479918692344101 I317 -R344 0.0477200893315035 D336 -L341 0.0471323475011802 T319 -F328 0.046510837855199 G329 -L340 0.0433998920703305 V318 -F328 0.0418477456177623 S315 -E342 0.0394569727844516 G313 -E349 0.0392799221396198 F328 -D336 0.0374732739957842 G313 -S346 0.0372317366378097 E334 -L340 0.0340673350905458 F328 -V337 0.03014576234068 T314 -E347 0.0282425568449132 E326 -V337 0.027843202482257 G313 -L341 0.0269216581892355 S315 -D336 0.0265645967291437 E332 -L340 0.0228910165983556 S315 -R344 0.0224974363628192 E321 -L341 0.0213468608239957 T314 -Y350 0.0206697992357396 V320 -E342 0.0203943600692003 L327 -E334 0.0173981412802071 I331 -V337 0.0166726635503369 V324 -I331 0.0166265360087303 V324 -E334 0.0149216888467092 V318 -E347 0.0123127192307755 I323 -T338 0.0104959877184978 E330 -E339 0.00833749897176173 T319 -D336 0.00823402719441813 G313 -I345 0.00591911405022483 F328 -E339 0.0048724562475547 E321 -L340 0.0040225908832725 T314 -V337 0.00349756541592605 D336 -E342 0.000650826701863672 T319 -E342 -0.00183932131736819 G313 -T338 -0.00370449657580085 G316 -D322 -0.0041767788112832 T314 -L340 -0.00454498896262701 D322 -E330 -0.00511390881648865 E325 -L341 -0.00633877509224101 I317 -E325 -0.00833822466794665 D322 -E339 -0.00849878486304334 I331 -T338 -0.00924699623433867 E325 -L340 -0.0156833250774584 E326 -K343 -0.0245530941332641 G312 -E347 -0.0263115435548156 L327 -E342 -0.0275032618090929 I323 -D333 -0.0302720260866236 T314 -Y348 -0.0380036819061629 D333 -L340 -0.0395792634642272 G316 -D336 -0.0401432328865932 G316 -E339 -0.0423420685765148 V318 -T338 -0.0451812325614487 E326 -L341 -0.0452417174915452 V318 -R344 -0.0458161157982646 V318 -H335 -0.0499488465414348 T319 -L327 -0.0522215791961624 I323 -I331 -0.0552533880616997 S315 -E339 -0.0602440898764542 I317 -I323 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F328 -H335 -0.114721859766012 E330 -L341 -0.114739227402642 V318 -E334 -0.11479567630233 D322 -R344 -0.116049822880551 Y348 -A354 -0.11702951835096 E332 -V337 -0.119797464394617 G316 -E347 -0.121231961703355 E325 -E330 -0.121384321851167 S315 -S346 -0.121959297741386 G312 -K343 -0.12414535327296 V318 -E326 -0.124234303115777 L327 -T338 -0.124791479658576 D322 -E334 -0.130046947343936 E330 -D336 -0.131184761488675 E339 -I345 -0.134422286058994 L327 -H335 -0.136896707258845 T314 -R344 -0.137125920389413 V324 -E339 -0.139324276134858 V337 -E342 -0.140124363545475 E325 -I331 -0.143843917416824 I323 -E332 -0.143857295774757 V337 -K343 -0.14389191041228 T338 -K343 -0.144046462017014 E349 -A354 -0.144903949531697 T314 -K343 -0.147211649654438 E326 -D336 -0.149080278713636 E321 -E342 -0.14916484530589 I323 -E339 -0.151525590451893 V324 -E342 -0.153349649857733 D322 -I345 -0.157105456611804 T319 -V324 -0.159459730128878 I331 -D336 -0.159835736802811 L341 -E347 -0.159900050873258 E321 -I345 -0.162137366931176 E325 -D333 -0.170198516246001 V320 -E326 -0.172770510110888 E326 -E342 -0.175611725705138 L327 -V337 -0.176410521201969 D322 -E332 -0.177691052522182 I317 -E339 -0.180515853707389 E326 -E339 -0.181510939475228 V320 -E334 -0.186200633630017 E321 -V337 -0.188373621937421 I323 -E342 -0.191093897915731 T319 -E339 -0.191843969818243 I317 -E347 -0.193005727537054 I323 -E334 -0.193817041373043 E330 -V337 -0.194243388500945 I323 -E330 -0.196241215686532 T314 -I345 -0.19836863468043 E330 -L340 -0.198702714282149 G316 -V337 -0.201061229742675 G316 -S346 -0.2031614866806 E326 -I331 -0.203304833371678 V324 -D336 -0.20453056051362 E326 -T338 -0.204565441577711 T319 -E325 -0.205039286486299 Y348 -S353 -0.205425577213473 E326 -E332 -0.207581833596838 E334 -E339 -0.209167998317618 T314 -S346 -0.213531105755472 V324 -L341 -0.214422746188481 T319 -E347 -0.215272484887892 T319 -I345 -0.223903391411211 I323 -V337 -0.237011233617043 S315 -T338 -0.241339151430069 V324 -H335 -0.254010399373706 T319 -L341 -0.262909467716549 V337 -R344 -0.28753709856466 V318 -L327 -0.288782125712883 T319 -L340 -0.295030036262379 V318 -E339 -0.299149689234834 G316 -L340 -0.30647924080187 S315 -V337 -0.317382113627202 G316 -T338 -0.328903335696496 V324 -E330 -0.338920271705737 G316 -E342 -0.344400959953743 S315 -L341 -0.348197167051778 V318 -V324 -0.351270593330086 I323 -L341 -0.377788229282734 V320 -L327 -0.388881381174567 T314 -T338 -0.402458277566829 H335 -L340 -0.40993083821859 E321 -F328 -0.429111529448329 L327 -L341 -0.431996880555541