[Mon Aug 29 16:39:15 2016] >Input file: TMA9EAE2M3G.pdb >TM segments: 444-465 MAIDEN score = 32.3051 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V452 -L465 10 K454 -L465 10 V452 -Q464 10 R451 -L465 1.19312198522367 L453 -L465 0.888063282018258 D450 -L465 0.782149314024326 D450 -A455 0.781941947823426 V452 -L462 0.742738704440817 A455 -L465 0.621887464074417 L449 -K454 0.589269657656176 D450 -A456 0.47005371628825 R451 -H457 0.413372448961749 R451 -L462 0.385945203536323 E447 -K454 0.380959169499486 A456 -L465 0.356459820243627 E447 -Q464 0.323235253143529 K454 -P463 0.312682797910885 V452 -D460 0.304473647205582 D450 -V458 0.26869744001457 E447 -L453 0.264467672519095 E447 -V452 0.258076412443621 K454 -Q464 0.243783687533458 K454 -D460 0.21749492818985 D450 -H457 0.209162012959156 R451 -V458 0.206133534137884 V444 -L449 0.205598225618767 A448 -D460 0.204924821704366 R451 -Q464 0.193785230432733 V452 -P463 0.171007762889491 A455 -D460 0.163741256183034 H457 -Q464 0.133652477289331 D450 -P463 0.133273121905156 D446 -A456 0.132584971668567 V458 -P463 0.122926945357064 H457 -L462 0.115735840550299 E447 -A456 0.113773231968342 T445 -V458 0.110473250590181 E447 -D460 0.101239335081199 V458 -L465 0.0911175261991537 L449 -Q464 0.0884583342096232 A448 -H457 0.0864808823285443 L449 -V458 0.0861810228836084 A448 -A459 0.0831955287807085 T445 -K454 0.0766941580273577 V458 -Q464 0.0691362929556851 T445 -V452 0.0687330142230378 T445 -L453 0.0676056827702606 L453 -F461 0.0654806987137895 T445 -A456 0.0593642359741118 D450 -F461 0.0568790604864704 L453 -Q464 0.0557953834285292 V444 -D450 0.0550034290086012 V444 -R451 0.0532013101398793 A455 -Q464 0.028049357305699 T445 -Q464 0.0242763177547989 K454 -F461 0.0179328192218227 L449 -H457 0.015991494433528 V452 -A459 0.0133685838091058 V444 -L453 0.0120840846068533 A448 -K454 0.00400253492392655 D446 -L465 0.00377495370469783 V452 -H457 0.000804791959235773 E447 -L462 -0.0125241825711974 A448 -F461 -0.0153092179464664 A448 -V458 -0.0153689867902065 T445 -L465 -0.0167567856462711 V444 -V452 -0.0265524819395448 D450 -D460 -0.0291936209434023 A448 -P463 -0.0313868403009425 A448 -L465 -0.039662860510249 L449 -P463 -0.0450230417291841 A459 -L465 -0.0482924738046737 A459 -Q464 -0.0571292434856723 D446 -A455 -0.0583827382129432 E447 -A459 -0.0676440421612109 T445 -R451 -0.0682359271405257 V452 -V458 -0.0822200970186404 L449 -D460 -0.0875419226175996 D446 -Q464 -0.0883759684911068 A448 -Q464 -0.0942355019729098 D450 -A459 -0.0950425363124765 A455 -P463 -0.102628119051559 L453 -V458 -0.102835240270926 L449 -L462 -0.104294558811663 E447 -H457 -0.10721498568769 L449 -F461 -0.11136195071417 A455 -F461 -0.116701009474632 D446 -L462 -0.123436264313005 T445 -D450 -0.129284634562316 L453 -D460 -0.133352812200233 A448 -A455 -0.136000144513334 D446 -K454 -0.13664652354556 K454 -A459 -0.139012661013064 D450 -Q464 -0.150126025823215 R451 -A459 -0.15160043452467 E447 -F461 -0.15554029949686 D450 -L462 -0.157757403195486 L449 -A455 -0.163490168711151 D446 -V458 -0.165304140011911 R451 -D460 -0.165569938129386 A456 -P463 -0.174175929809912 R451 -F461 -0.178328280512245 E447 -L465 -0.182393755999361 D446 -R451 -0.187098990653225 R451 -P463 -0.191454824506555 A448 -A456 -0.202005587677136 K454 -L462 -0.208046887071937 A456 -Q464 -0.214809503742206 E447 -A455 -0.220930117228685 A456 -L462 -0.2257208518525 D446 -H457 -0.23011911733262 V452 -F461 -0.240310574842672 H457 -L465 -0.252112723749901 D460 -L465 -0.257089670762361 D446 -L453 -0.269887136705062 A456 -F461 -0.276713566970344 R451 -A456 -0.280067003951642 D446 -V452 -0.296522384203452 A448 -L453 -0.299535675500837 A455 -L462 -0.301738944216871 H457 -P463 -0.302880153884923 L449 -A456 -0.303908485431567 A448 -L462 -0.304966127948699 E447 -V458 -0.306230640351272 L453 -L462 -0.312461706667744 E447 -P463 -0.328793882016941 L449 -L465 -0.396717471323837 L453 -P463 -0.519350816829399