[Mon Aug 29 16:52:02 2016] >Input file: TMB0G9Q5M6G.pdb >TM segments: 391-399_ 401-412_ 484-499 MAIDEN score = -2.5924 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V397 -K404 0.511752353313411 T486 -L495 0.36371618676378 L487 -M493 0.28554240693973 G398 -K404 0.265829728938448 L487 -E494 0.248136136608547 A402 -K409 0.226325831964806 T486 -G492 0.224347567956261 T405 -L411 0.207306175798522 Q485 -M493 0.201045822587721 I396 -M407 0.19120237587266 K404 -L411 0.184306290644294 G489 -L495 0.182944279645312 G398 -T406 0.155814168896223 P488 -E494 0.153622009809801 I484 -G489 0.150743831848455 I396 -K404 0.148213654288288 G398 -M407 0.146432573379971 G401 -M407 0.141086003773081 P488 -L495 0.138239087915723 I396 -L410 0.133286618190082 Y491 -A499 0.121846179790584 I484 -L495 0.116307574781404 T486 -N496 0.115879942798263 I396 -G401 0.110702586475637 G489 -E494 0.109583125896601 Q485 -Y491 0.1017858806429 I484 -G492 0.101366733326023 G398 -V408 0.099417425170123 P399 -M407 0.0987520449123336 T486 -E498 0.0923305905873466 I396 -L411 0.0917814053833142 T406 -M412 0.0845073826444849 G401 -V408 0.0751570144447649 I484 -G490 0.0746039984830338 I394 -M407 0.066206680811904 T486 -E497 0.0644381100414551 P399 -T406 0.0593665144310016 G492 -E498 0.057900498274138 Y491 -E498 0.044452422371835 Q485 -E494 0.0368157380348015 A402 -L410 0.0360901909353095 I396 -V408 0.0295194454865602 A395 -M407 0.029450385323103 I396 -K409 0.028079856797584 I394 -K404 0.0235220412410126 G398 -T405 0.0181503123061355 T486 -A499 0.0159370476910536 Y491 -E497 0.00817248002479509 A402 -V408 0.00763857523669398 Q485 -G492 0.00696865889184028 M493 -A499 -0.0220246048401922 I394 -V408 -0.0221985031980978 A395 -V408 -0.0251972566955629 A395 -T405 -0.0313870733758019 V397 -V408 -0.0315392663368401 M407 -M412 -0.0316522097317216 G403 -L411 -0.0365471828338204 I396 -T405 -0.0405002384355186 A395 -T406 -0.0419339082817364 I394 -T405 -0.0436134968176397 Q485 -L495 -0.0448274047455683 T486 -M493 -0.0450823502162529 I484 -M493 -0.0527146699576496 G490 -N496 -0.053197610429816 G492 -A499 -0.0535795236458956 I484 -Y491 -0.0547331892961185 A395 -A402 -0.0559616783851244 A395 -G403 -0.0607878137314428 L487 -N496 -0.061397707809006 T406 -L411 -0.0661638470916994 E494 -A499 -0.0681872100624512 V397 -K409 -0.0742771305098548 L487 -E497 -0.0755319945076844 G490 -E497 -0.0789778323708945 V397 -T406 -0.0826426754336467 G403 -V408 -0.105062776696787 A402 -M407 -0.10956831715553 L487 -G492 -0.110949547651538 K404 -L410 -0.121626052744692 V397 -M407 -0.131608646878158 A395 -K404 -0.133779350248724 G401 -K409 -0.140860270539154 G403 -K409 -0.142530363887609 P488 -M493 -0.149069225483797 Q485 -N496 -0.153939091956796 I396 -T406 -0.155015930016503 A395 -K409 -0.162006696065256 T486 -E494 -0.163654882667618 G490 -L495 -0.17373217015231 G401 -T406 -0.190301864427084 P399 -T405 -0.190669192039008 K393 -V408 -0.195128585342656 M493 -E498 -0.197469871267978 G492 -E497 -0.200825650852555 V397 -G403 -0.205504240924776 V397 -T405 -0.21496924319914 I396 -G403 -0.218957710586144 I396 -A402 -0.224168482440738 P399 -K404 -0.284309987623542 G403 -L410 -0.286620817885876 T405 -L410 -0.304912145569388 Q485 -G490 -0.315499086415794 Y491 -N496 -0.385294249467336 K404 -K409 -0.394206721589057 G398 -G403 -0.396162354940253 L487 -L495 -0.408943064488752 V397 -A402 -0.448985194923288 T486 -Y491 -0.508012433258062