[Mon Aug 29 16:58:35 2016] >Input file: TMB0WKL3M3G.pdb >TM segments: 172-182_ 184-191 MAIDEN score = -0.3026 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- V177 -K182 0.731310187974774 V177 -L184 0.351198596272667 Q174 -K182 0.348152896257453 H179 -K185 0.32144341920738 L181 -T186 0.236084577779753 G176 -L181 0.210819285807413 S175 -K180 0.178881240232337 K180 -L187 0.170372911402259 K182 -D188 0.157487420713204 G176 -L187 0.133468570177548 L173 -L189 0.119435744579742 Q174 -H179 0.116366822409034 L173 -L181 0.110154625984933 L173 -L184 0.106533288423904 L184 -L189 0.0898622999844214 F178 -L184 0.0835598164443843 K180 -K185 0.0748883327769061 Q174 -T186 0.0692499813735239 Q174 -L184 0.0687745655839826 V177 -T186 0.0683724279846172 S175 -L187 0.0612177235763511 S175 -L189 0.05737672853361 N172 -N190 0.0553770434026435 G176 -L184 0.0518860187414791 F178 -T186 0.0422481622623216 S175 -D188 0.0398715445934315 L173 -T186 0.0381346832771963 V177 -D188 0.0360395540402099 V177 -K185 0.0346468156141712 S175 -L184 0.0294571881108427 L173 -H191 0.0287778671804506 F178 -K185 0.0187781187324846 F178 -D188 0.0166437056041673 S175 -T186 0.0157824376923683 G176 -T186 0.00959073974208624 G176 -L189 0.00672867176536585 G176 -D188 -1.30212439927169e-05 N172 -L187 -0.000159484494966833 Q174 -N190 -0.0127857517394003 K180 -T186 -0.0197065964854484 S175 -L181 -0.02155975015385 S175 -K185 -0.0410660942028334 N172 -H191 -0.0416369828475185 L181 -L187 -0.0441594963863632 Q174 -L189 -0.049807082887094 S175 -K182 -0.0522248372296913 V177 -L187 -0.0565219356993332 G176 -K185 -0.065026053011616 Q174 -D188 -0.0672667584260048 L173 -N190 -0.0790780195909373 N172 -V177 -0.0827678269570459 L173 -F178 -0.0836703642072263 H179 -L187 -0.0879512023901485 H179 -T186 -0.0921095084069696 F178 -L187 -0.0976075064445014 Q174 -H191 -0.108707023345209 L181 -D188 -0.122852536187687 N172 -D188 -0.159325732762429 Q174 -K180 -0.181619112921072 Q174 -L181 -0.203178529625415 Q174 -K185 -0.205953005999408 K182 -L187 -0.208016277853255 V177 -L189 -0.218574877749008 L173 -K182 -0.238110889096527 N172 -L189 -0.246457246605935 G176 -K182 -0.274262777941232 L173 -D188 -0.303159904596801 Q174 -L187 -0.328474115900554 H179 -L184 -0.395192045541612 L173 -L187 -0.402616785452205