[Mon Aug 29 16:59:56 2016] >Input file: TMB0WPC7M2G.pdb >TM segments: 234-277 MAIDEN score = 10.3093 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- K252 -L276 10 L251 -D275 0.873759472822125 L250 -D275 0.754875957094041 L255 -D277 0.696743386096145 A249 -F273 0.677559175081117 L255 -L276 0.654506960611834 P245 -L250 0.624447629866599 A249 -L276 0.610298937522197 P253 -D275 0.592683094839077 S246 -L251 0.582425534992716 P253 -L276 0.559101763170508 S254 -L276 0.539304561810965 L251 -L276 0.497929405032531 V248 -S272 0.441272802612972 K252 -F273 0.41687248198589 P253 -S272 0.355127225197197 K252 -F274 0.342040801241066 P245 -P253 0.328659026544235 Y259 -P264 0.293845081906264 S246 -P253 0.267030136032612 V256 -L276 0.239955181021536 A242 -K252 0.238569464758666 D269 -D275 0.21597475497174 A247 -S254 0.210195857795792 A257 -D277 0.204221235100933 L258 -N263 0.20262271266252 L234 -N239 0.197199145902767 V248 -F274 0.189362144666721 G261 -Q266 0.18884277189814 A247 -E271 0.188758399997122 L258 -S272 0.179271625587895 G261 -M267 0.176751730007363 K252 -D270 0.171880602428139 D270 -D277 0.167342817528251 M267 -S272 0.158050567652915 P253 -D277 0.153902089538492 N263 -D269 0.152014336171342 A243 -A249 0.144651317498774 V248 -D270 0.139355600977909 N263 -L268 0.134200712095181 L250 -L258 0.128602063397325 A249 -V256 0.121212039804664 A243 -V248 0.118063491197322 A247 -P253 0.116460142626558 A247 -L255 0.113854852276996 A257 -F273 0.111859735245949 L258 -I265 0.110839111514116 S246 -D275 0.105756137079904 E271 -D277 0.0996984533650138 G238 -A243 0.0966873611197441 L236 -A242 0.0917541586225663 V244 -K252 0.0879575331455933 I265 -D270 0.0873456524831027 L258 -L268 0.0866272464282982 A242 -A249 0.0846152693902029 A249 -E271 0.0805779533093576 L235 -A242 0.0749020454939178 L234 -P245 0.0747067574752446 E271 -L276 0.0743127292614714 L250 -V256 0.0736283185982376 A249 -D277 0.0690351739828188 Q237 -V244 0.0670169520613102 V256 -D277 0.0660844492384776 S246 -L255 0.0646389838081785 A247 -L258 0.0638081155186765 I260 -F273 0.0612515541931522 A242 -L251 0.0578058361263842 A249 -A257 0.0512166002883232 A242 -A247 0.0465867035424024 A257 -S272 0.0454375811750669 V248 -D277 0.0448892480437131 M267 -F273 0.0428431691800097 S246 -L276 0.0427650943514131 L258 -D277 0.0405265622762778 A249 -I260 0.0392305241213711 L236 -A243 0.0372461355469436 L234 -A242 0.0341119645211769 V256 -F274 0.0338554729440207 L255 -S272 0.0312691958489479 G238 -V244 0.0310569275720658 A247 -K252 0.0297823515229574 A257 -D275 0.0236688597022988 L258 -D270 0.0228235372371588 G261 -L268 0.0224200417506166 A242 -D275 0.0208688939613038 L255 -I260 0.0190282389473833 V244 -L250 0.0182601432916716 S254 -F274 0.0175728501054151 V248 -Y259 0.0175578726813388 P253 -L258 0.0143204833945401 I260 -M267 0.0137115600721236 A243 -K252 0.0132158269660776 L258 -F273 0.011866728910376 S254 -S272 0.00787295766745455 L251 -A257 0.00639482696044169 A249 -F274 0.0027934520709163 V248 -A257 0.00224309960902658 K252 -E271 0.000488897338787986 A249 -L258 -0.00242240294230278 K252 -D277 -0.0105622171046423 P253 -F273 -0.0124837401088447 A243 -S272 -0.0126127457878029 A247 -F273 -0.0148288083258006 A249 -D269 -0.0148373752828617 S246 -S272 -0.016257484112967 V244 -A249 -0.0179826741543372 I265 -E271 -0.0201899778620382 I260 -Q266 -0.0220225970971002 L250 -E271 -0.0261461660273028 A247 -D270 -0.0296309564144934 V256 -D275 -0.0321637509774453 L250 -D277 -0.0324918094595881 P264 -D269 -0.0337576219766291 S272 -D277 -0.0339994493956205 A243 -P253 -0.0370959010543204 S254 -F273 -0.0383513730377962 P264 -D270 -0.0395330948647044 F241 -S246 -0.0409576942483745 P253 -F274 -0.0422074608902648 V256 -F273 -0.0445173955108542 P245 -D275 -0.0446890185440862 L251 -F274 -0.045565048395507 S254 -D277 -0.0460997755574467 S254 -D275 -0.0464897186863151 D269 -F274 -0.0485040431716399 I260 -L268 -0.050878387809469 A247 -V256 -0.0526831051892822 S246 -K252 -0.0552112607355312 A242 -P253 -0.0648934674030288 S254 -Y259 -0.0650279957357537 A249 -L255 -0.0663918292692829 A249 -Y259 -0.0667921951685171 A247 -F274 -0.0696642232904114 L251 -E271 -0.0708739719705551 K252 -L258 -0.071759396902654 I260 -S272 -0.0728556277386634 L234 -V244 -0.0734040432360228 Y259 -F273 -0.0736274364706571 V244 -P253 -0.07377785357264 A247 -L276 -0.0757977854665439 V256 -S272 -0.0772581268820793 S246 -F273 -0.0783391396423446 V248 -E271 -0.0795716988403044 A243 -D275 -0.0796399081888863 V248 -V256 -0.080608030746219 S246 -S254 -0.0813760650257816 L234 -A243 -0.0822877300973328 V248 -P253 -0.0825794461482365 L235 -F241 -0.0838781005581337 L235 -D240 -0.0846125798188387 L258 -D275 -0.0853336456352081 L250 -D270 -0.0857549702207788 D270 -L276 -0.0871973524861209 I260 -D270 -0.0877943335952294 L234 -D240 -0.0880993860607171 A243 -L251 -0.090112153677965 L251 -L258 -0.0911792662497195 I260 -D269 -0.091547882105923 L268 -F273 -0.0921881377818776 L250 -L255 -0.0936830090972691 P245 -L251 -0.097239696980111 D269 -L276 -0.107584419454654 V248 -D275 -0.11258914202472 Q237 -P245 -0.115737129216846 L236 -F241 -0.118835480964893 L255 -D270 -0.119519344356342 A247 -D275 -0.122270738027799 L258 -F274 -0.124448779664117 L268 -F274 -0.126855956080995 A257 -D270 -0.127554874555437 V248 -L255 -0.128059342431186 F241 -L250 -0.129736786839038 L235 -A243 -0.130429162837449 L251 -Y259 -0.136218808066683 A257 -F274 -0.136599936503059 A242 -L250 -0.14225755546636 L250 -L276 -0.143322778906976 K252 -S272 -0.148170806037701 Y259 -I265 -0.148980632688775 L258 -E271 -0.153627313371694 P245 -K252 -0.156347431726862 L255 -F273 -0.15694374451839 V244 -L251 -0.157612702007254 L251 -D270 -0.158161574910733 L234 -F241 -0.158723956376476 E262 -L268 -0.159727354835844 L250 -A257 -0.161847616400451 L255 -F274 -0.161987767639835 L250 -F274 -0.163215140376059 A249 -S272 -0.164833560270352 L250 -S272 -0.166815587216163 Q237 -A242 -0.168538675101748 D270 -D275 -0.168950585599473 Y259 -L268 -0.169404960787527 A247 -D277 -0.170845886632065 P245 -S272 -0.172337407419628 E262 -M267 -0.172990104977311 I260 -I265 -0.176565752456526 L258 -D269 -0.179495098864037 L251 -F273 -0.19257190693042 A249 -S254 -0.193052529719386 Y259 -L276 -0.193488910055527 L258 -L276 -0.19430028778205 Q237 -A243 -0.212575095551042 V248 -I260 -0.218361510158857 A249 -D270 -0.223667791737972 V248 -L276 -0.225082407681029 L255 -D275 -0.229213615400006 V248 -D269 -0.245545734087205 V248 -S254 -0.250272144614027 L251 -D277 -0.25696451561848 L250 -F273 -0.269555569651116 V244 -D275 -0.278401061607303 A257 -L276 -0.282258711817828 Y259 -D270 -0.282920377418502 K252 -A257 -0.286731286007087 A243 -L250 -0.299667853953891 L251 -V256 -0.31507795184555 L251 -S272 -0.330936003377577 V248 -F273 -0.331066904253779 V248 -L258 -0.407566253633436 A247 -S272 -0.419219921091306 A249 -D275 -0.575932216785165 K252 -D275 -0.684444959363901