[Wed Nov 23 03:33:35 2016] >Input file: TMB1B3L4E13G.pdb >TM segments: 36-55_ 115-130_ 170-186_ 212-233 MAIDEN score = -17.2532 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I115 -I180 2.18305408309622 I115 -I182 1.19663805200016 W174 -I179 1.0727435571755 I115 -I179 0.619469708919308 P49 -L122 0.618658391358332 I115 -P183 0.607383884120721 P52 -L122 0.529350896947427 I48 -W174 0.528812646272907 I48 -G176 0.452089003186539 I53 -L122 0.40076561304989 M224 -H231 0.38424017590084 M43 -I48 0.381494640594528 S185 -S225 0.362639163382865 S221 -P228 0.360685900588746 A45 -W174 0.344021582147732 A45 -F173 0.293825960316452 P170 -N227 0.289911243235882 P49 -T172 0.286431296478525 Y186 -P228 0.277092516075331 P52 -K123 0.274957277016299 S221 -Y226 0.274884860451094 P49 -K123 0.269716305273514 Y178 -H231 0.267036877403382 I48 -F173 0.256318615816877 L117 -P183 0.249414575964872 S118 -K177 0.240498033770686 P170 -H231 0.237914423468294 L44 -T172 0.235197413555902 Y178 -S225 0.235016436605968 I115 -S184 0.233830061083609 K177 -P183 0.22457729538845 S118 -A124 0.223679644278979 S221 -N227 0.207629733742891 N218 -Y226 0.206929109499525 I115 -L181 0.202942333242418 P170 -K177 0.189759257312114 G176 -S184 0.185923895734598 L44 -K177 0.182686518919752 K177 -S225 0.182464712423879 M43 -Y175 0.17811352824767 K123 -Y175 0.174915717017566 S118 -Y178 0.174259379205101 S118 -Y175 0.174192639729984 H213 -I219 0.172163797071604 Y178 -Y186 0.171658039243281 Y175 -P228 0.170440201142855 Y36 -L41 0.16643092714121 K37 -T172 0.166342907704133 K123 -F173 0.165150355789199 K120 -W174 0.160734923722027 I116 -I179 0.159073196060802 F55 -S118 0.15773458771672 L122 -K129 0.156551491315816 I180 -M224 0.151094674580517 T42 -W174 0.151072133682804 M224 -I232 0.150957343697581 Y40 -Y175 0.143759496822106 L41 -K177 0.143601536023912 M43 -W174 0.142902312214942 I215 -I222 0.140926506902319 Y178 -Y226 0.140506253666352 Y186 -Y226 0.139922242150763 L181 -I223 0.139897072243634 S118 -G176 0.139118071629763 P52 -L125 0.137261683483928 S185 -Y226 0.136599389878581 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