[Mon Aug 29 17:05:13 2016] >Input file: TMB1H134M1G.pdb >TM segments: 110-135_ 139-151_ 299-305 MAIDEN score = 19.7904 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- N115 -A123 10 S129 -D147 10 I130 -G148 0.708590519048494 I127 -A149 0.62121607295823 N115 -Y121 0.569571578057942 L135 -S141 0.520371617403785 I116 -Y121 0.494528033254088 I130 -D147 0.391480697176592 Q126 -E131 0.311879455832161 E113 -L124 0.308892458951615 E146 -R151 0.287099589467709 H134 -S139 0.278661988878134 P128 -D147 0.278228717090397 I130 -A149 0.241535952293095 Q112 -S125 0.233786791298976 L135 -V140 0.210755933047454 E113 -T120 0.209881422033323 R117 -D122 0.169395507530008 I130 -E146 0.163263816786931 H134 -V140 0.155022572061147 Q112 -L124 0.150937699462603 I127 -D147 0.145719267309941 H134 -S141 0.144417870736485 E131 -S144 0.140238607981982 N115 -L124 0.132640854308874 E132 -G148 0.124810423664083 L111 -I116 0.123089089010903 Q112 -T118 0.119662328127941 I116 -Q126 0.115205098290273 E113 -A123 0.111733873164875 Q112 -F150 0.10958581430277 L133 -S141 0.109540311587578 L135 -S144 0.10892266140528 S141 -E146 0.105680234932909 P128 -L133 0.0938862524267083 I119 -L124 0.0938017842234385 Q112 -R117 0.0925657334045411 L300 -N305 0.0901882212392813 Q112 -I127 0.088267407669874 E131 -D147 0.0881790984012447 L133 -V143 0.0866643510739578 I116 -A123 0.0810737338691583 I127 -E146 0.0810230996580112 E113 -Y121 0.0800670817818605 I130 -A142 0.0776096491938283 L135 -V143 0.0670559340425418 I116 -L124 0.0659603613214991 N115 -Q126 0.0624543696245907 N114 -L124 0.0619939306604032 I130 -L135 0.0619024592949047 S129 -E146 0.0590855301245128 N114 -I127 0.0563030069547485 I130 -S144 0.0558799519892615 Q126 -E132 0.0549592068402451 Q126 -D147 0.0538456276586026 N114 -A123 0.0517269618473195 N114 -Y121 0.04980774818239 H134 -I145 0.0496583131250874 L135 -I145 0.0491569326102443 Q126 -A149 0.0408082113305488 L133 -A142 0.0394676253634203 I130 -V143 0.0350909506117527 P128 -R151 0.0345972978076375 H110 -I127 0.0315813056456973 L111 -S125 0.0307724222053938 L133 -E146 0.029834176553015 I127 -E132 0.0276749935008453 I127 -F150 0.0252888494965431 H110 -L124 0.0227459349280863 Q112 -T120 0.0207995764117461 Q126 -F150 0.0198770810758875 I127 -R151 0.0161211044537599 T120 -S125 0.0145832373535448 H110 -F150 0.0120116601766176 Q112 -Q126 0.0120074543504756 T118 -S125 0.00987579642049585 E131 -F150 0.00487578943163017 L111 -T118 0.00470898487213467 R117 -A123 0.00362483052191287 L111 -Q126 -0.000519221537228276 Q112 -D122 -0.000821633345159167 P128 -E146 -0.00560560626921047 L124 -A149 -0.00666460417991654 A123 -P128 -0.00761687057790317 L111 -D122 -0.00788630388616163 L111 -A149 -0.00894852976917182 S125 -E131 -0.0089575035347127 I127 -I145 -0.00941581212654974 N115 -S125 -0.00945131558101497 T118 -L124 -0.0112821434308303 P128 -I145 -0.0126506165941574 D122 -P128 -0.0139944774780999 E132 -A149 -0.0154153504590884 L133 -I145 -0.0161057189864762 E113 -I127 -0.020610499152149 L133 -V140 -0.0222781968835237 E132 -V143 -0.0244598645473699 P128 -A149 -0.0248395707322759 E113 -Q126 -0.0321673486670777 S129 -S144 -0.0372134332139149 I145 -R151 -0.0418682888574633 S129 -V143 -0.0422046335645048 H134 -S144 -0.0434870498467359 E113 -S125 -0.0501054564666539 N115 -I127 -0.0546264450827803 N114 -D122 -0.0547570704338317 E132 -S144 -0.055626368794681 D122 -I127 -0.055652506512464 S129 -H134 -0.0559199479509802 L124 -S129 -0.0579865249705858 P128 -G148 -0.0591085939519838 L133 -S144 -0.059579282488432 Q112 -I119 -0.0598005664127221 H110 -A149 -0.0604772205198572 N114 -T120 -0.0606428639880672 Q126 -G148 -0.0607344564317778 L111 -Y121 -0.0664933092796831 L111 -P128 -0.0696883280667659 Q112 -Y121 -0.0731520317644039 Y121 -Q126 -0.0738118225653537 N115 -T120 -0.0738231328817148 L111 -I127 -0.074488195148841 L111 -T120 -0.0763976240542119 N114 -Q126 -0.0772696334942001 S129 -I145 -0.0812715084639741 S125 -A149 -0.0815683350831531 R117 -S125 -0.0816775359936852 L133 -D147 -0.086652774601316 E132 -A142 -0.0886770583173297 E113 -D122 -0.0948046321227938 E132 -D147 -0.0973727954246866 E131 -A149 -0.097512221043651 S129 -R151 -0.106654065941756 E132 -S141 -0.110478941428929 H110 -N115 -0.111649356134315 H110 -A123 -0.112115700335859 L133 -S139 -0.115892286352245 E131 -E146 -0.117017464783209 I127 -G148 -0.119532805404877 H134 -A142 -0.122618236634431 L124 -F150 -0.126481730741117 S129 -F150 -0.128960702643743 L135 -E146 -0.134823529120838 R117 -L124 -0.138275512943376 I130 -F150 -0.139759046787976 E132 -I145 -0.143841183299674 T118 -A123 -0.15381335033408 L111 -F150 -0.162900177439955 Q112 -A123 -0.164702466856237 E131 -R151 -0.175879986772162 E113 -T118 -0.17801706494608 H134 -V143 -0.179284719694768 E131 -I145 -0.182167329087938 E113 -I119 -0.191358100958426 E132 -E146 -0.197666768337133 E131 -G148 -0.199703290023444 P128 -F150 -0.216895852555764 I116 -S125 -0.217735533586337 I116 -D122 -0.237261037430033 I130 -R151 -0.239368546635525 I130 -I145 -0.250737337082903 L135 -A142 -0.274084027102045 N114 -I119 -0.281432280339779 S129 -A149 -0.2829132816867 L111 -A123 -0.317703246459473 N114 -S125 -0.325239058149806 L111 -L124 -0.415463782823201 S129 -G148 -0.465501490568704 N115 -D122 -0.793304946417266