[Fri Aug 26 17:05:16 2016] >Input file: TMB1ZF68M2D.pdb >TM segments: 543-567 MAIDEN score = 10.4500 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M561 -E567 10 M547 -V552 1.74316232287172 V552 -T557 0.714270755259955 I559 -E567 0.670517196394883 R549 -D566 0.345413151030208 T543 -P555 0.294350941138663 G551 -E567 0.286567980057808 Q548 -T557 0.247397642265833 T543 -T557 0.210667378288129 L546 -M561 0.202794377500235 V552 -L558 0.190813230333021 M547 -V553 0.177230485860822 L560 -D566 0.174779304174095 L546 -G565 0.160468436772201 T543 -G551 0.156202198600749 L546 -G554 0.144025659543177 R562 -E567 0.140746180761005 Q548 -V553 0.133493635993986 T543 -G554 0.132960600875507 R549 -G565 0.132209533009676 L546 -P555 0.1191419670846 T557 -E567 0.117800456016954 L546 -L558 0.100399877547992 V552 -L560 0.0986077375480421 A545 -V553 0.0944956199540008 V552 -I559 0.0911620826708663 M561 -D566 0.0907162697458923 R549 -G554 0.0849929986077677 F550 -E567 0.0763780270897865 M547 -D566 0.0756629998299152 T543 -F550 0.0750116350561045 L546 -D566 0.0713865687075486 T543 -V552 0.0633297136274724 R544 -G551 0.0633240563176871 G551 -L558 0.0559023536534216 V553 -L558 0.0501200812025449 R544 -P555 0.0467169370137757 F550 -G565 0.0463033969793312 R549 -I559 0.0455009197240157 L546 -T557 0.0454270439075248 R544 -R549 0.0451711531129042 I559 -G565 0.0430087633524052 M547 -L560 0.0339710420761037 R549 -T557 0.0313077237429251 A545 -P555 0.0269408753508431 Q548 -I559 0.0230914321979574 G551 -I559 0.0225057849663202 V552 -E567 0.0216874451074925 G551 -L560 0.0112206482394708 R544 -G554 0.00975746733832954 F550 -L558 0.00557862489276761 M547 -L558 7.33538740256279e-05 F550 -M561 -0.00809978978511466 R549 -E567 -0.00861002546753653 T543 -V553 -0.00863477901355561 Q548 -E567 -0.00916347639453075 G554 -I559 -0.00994160815182232 Q548 -P555 -0.0221936116955206 R544 -V553 -0.0223765546726069 M547 -M561 -0.0250447895176098 Q548 -G554 -0.0286248522615464 R544 -T557 -0.0358742432190085 M547 -G554 -0.0369407988100332 A545 -G554 -0.0410700914123163 R549 -M561 -0.0428309720868008 Q548 -L558 -0.0435427431105504 F550 -D566 -0.0436865021294324 G551 -D566 -0.0439711411870718 P555 -L560 -0.046326700934447 R544 -P556 -0.0477727492650906 L546 -E567 -0.0482263007196027 I559 -D566 -0.0487968730617117 L546 -V553 -0.0501551238674924 G551 -T557 -0.0502993414819524 G551 -P556 -0.0663423386098516 I559 -D564 -0.0713058067056971 T543 -Q548 -0.0722986554474767 M547 -P556 -0.0737751495594976 Q548 -D566 -0.0792854868370165 F550 -L560 -0.0864611836649982 L546 -I559 -0.0932205924809016 Q548 -P556 -0.0937339154035084 L560 -G565 -0.0983154498209331 R549 -L560 -0.101426124429998 R544 -V552 -0.102803925065202 V553 -I559 -0.104178200315271 F550 -P555 -0.105020722902922 R549 -P555 -0.110679265916301 V552 -M561 -0.112151753204431 M547 -E567 -0.112917523822141 L558 -D566 -0.117920970660206 T543 -R549 -0.121369026899287 R549 -L558 -0.132543963603001 F550 -R562 -0.133695662734794 F550 -D564 -0.135921325340388 M547 -P555 -0.136726718236666 F550 -P556 -0.149794654844567 G551 -M561 -0.151613201919325 L546 -P556 -0.156427083742246 L546 -L560 -0.160293141829899 F550 -I559 -0.166779274101066 M547 -I559 -0.174314151114074 L558 -E567 -0.210949598664884 R544 -F550 -0.212450787603064 A545 -G551 -0.237310854237664 L546 -G551 -0.248588870071043 T543 -P556 -0.257462332098354 M547 -T557 -0.270041232223469 V552 -D566 -0.278725016320112 A545 -V552 -0.300195202713936 F550 -T557 -0.327455358013326 L546 -V552 -0.37052384550646 A545 -F550 -0.464106028923086 L560 -E567 -0.473444593194245