[Mon Aug 29 17:10:41 2016]
>Input file: TMB2ATM9M1G.pdb
>TM segments:  10-17_ 28-40

MAIDEN score = 29.3186

Below is the ranking list of the residue pairs and their related pseudo-energy
(the lower, the better). This includes inter-chain residue pairs.

The maximum (least favorable) pairwise energy value has been set to 10.
See the MAIDEN software article:
Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161.


-----------		----------------
Calpha pair		Empirical energy
-----------		----------------
Q14 -Y31   		10
I10 -C38   		10
R12 -P37   		1.63556215713373
I10 -T39   		1.63034505626914
I16 -W29   		1.33226975360348
R13 -P37   		0.998268794710152
L11 -P37   		0.932405665698765
R12 -V36   		0.738834888339095
R12 -C38   		0.596597688306393
I10 -N40   		0.595553789305251
Q14 -W29   		0.505000729247534
L11 -N40   		0.503713415699922
R13 -V35   		0.490069917277328
I10 -P37   		0.486490409228935
R12 -V35   		0.483653250851316
R12 -Y31   		0.482253224763537
R13 -Y33   		0.481798277301426
Q17 -W29   		0.4798171228812
L11 -C38   		0.463879205025548
R13 -C38   		0.383584015290029
I16 -H28   		0.343514417615417
L11 -T39   		0.338050007182197
R13 -V36   		0.288761120641286
Q14 -Y33   		0.277743979467044
Q17 -Y33   		0.270808791471728
I16 -G30   		0.239569180674015
R34 -N40   		0.176400930322689
I10 -V35   		0.17557957094147
R12 -W29   		0.172278732204339
R12 -Y33   		0.170769327689567
Q14 -A32   		0.150608300598868
H15 -V35   		0.149864812241147
G30 -V36   		0.111813374659865
R13 -G30   		0.107851346867651
Q14 -H28   		0.105984151104732
L11 -Y31   		0.103829977991113
I10 -V36   		0.0951423258299204
Q17 -R34   		0.0932662297888709
G30 -V35   		0.0890005370253339
A32 -C38   		0.0852997710716542
R12 -R34   		0.0816598088972742
I10 -A32   		0.0645894197415799
R13 -R34   		0.0623307893791124
Q14 -V36   		0.0545201433311557
Y33 -N40   		0.0519825403602467
Y33 -T39   		0.0407471842844596
L11 -G30   		0.0337812643672479
R12 -A32   		0.0333753992945693
G30 -P37   		0.0286792362755768
Q14 -T39   		0.0285340576801367
I10 -Y31   		0.0176578731853949
L11 -A32   		0.0167612487228066
H15 -H28   		0.00800884481089703
R13 -T39   		0.00768926759256683
L11 -W29   		0.00163058562707974
L11 -V36   		-1.66325253783128e-05
Y31 -C38   		-0.00564208014364631
H15 -A32   		-0.0103129134944355
H28 -Y33   		-0.0132118357220015
I10 -Y33   		-0.0142729233701964
Q17 -H28   		-0.014404049877947
Q14 -C38   		-0.0175129461157271
R13 -W29   		-0.0319404098320093
R34 -T39   		-0.0328893695936723
I10 -R34   		-0.0432988415577249
I16 -Y33   		-0.0520394793102081
I16 -A32   		-0.0668423237192322
V35 -N40   		-0.0694313780981899
A32 -N40   		-0.0717171970413402
I16 -Y31   		-0.0783748095161627
R12 -G30   		-0.0862943125220061
Q17 -G30   		-0.0902934786675074
L11 -Y33   		-0.094081852018842
R13 -H28   		-0.116675031917102
A32 -P37   		-0.125658218118486
L11 -R34   		-0.141347584089066
R13 -N40   		-0.146048365918761
Q14 -R34   		-0.148538567005955
W29 -R34   		-0.149963139183902
Q17 -A32   		-0.152787528824176
Q14 -G30   		-0.153709718490832
I16 -R34   		-0.16238525381608
Q14 -N40   		-0.166853998710276
Q14 -V35   		-0.175729437642566
Y31 -P37   		-0.185519092895059
Q17 -Y31   		-0.186691377659957
L11 -V35   		-0.187876285680928
R12 -T39   		-0.202172650824599
Y33 -C38   		-0.232766586585159
H15 -R34   		-0.237428845021081
R12 -N40   		-0.251804745652859
H15 -W29   		-0.258393898841355
H15 -V36   		-0.272747152648929
Y31 -V36   		-0.28946470866533
H15 -P37   		-0.30921271363598
H15 -Y31   		-0.364163551264259
H15 -Y33   		-0.399322739871905
Q14 -P37   		-0.482294860437921
H15 -G30   		-0.512010524623798
R13 -A32   		-0.518124221441033
R13 -Y31   		-0.657312885673274