[Fri Aug 26 17:34:30 2016] >Input file: TMB2RV69M1D.pdb >TM segments: 23-60 MAIDEN score = 18.5534 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- H41 -R57 10 K39 -L58 10 D45 -L53 1.19122701129552 H41 -F56 0.711316890414983 K40 -I59 0.649892445324177 K40 -F56 0.626314426463498 A47 -L53 0.616565927216245 H41 -L58 0.584541907065499 S44 -L53 0.564759252445292 R30 -S44 0.538616959274966 S44 -S55 0.444447220230564 L33 -A42 0.372454571946884 Q32 -G43 0.365131303130494 N46 -L53 0.351497763773116 E34 -G43 0.344183665684096 P26 -N46 0.334394484142361 Q24 -P50 0.252657624479116 A31 -G43 0.241217159855692 N46 -R52 0.215577700200406 A31 -S44 0.213470067957942 P26 -S44 0.211556012782363 P26 -G49 0.192462402088109 S44 -P50 0.191421797418406 A31 -F56 0.190973218020236 A47 -S55 0.179613504512068 E34 -K40 0.178044273957112 P26 -D45 0.178039678733892 D45 -R57 0.167843637700642 K28 -T48 0.167706001593249 S44 -V54 0.16680197805904 G43 -F56 0.155015445792751 R27 -A47 0.152435247247256 K28 -N46 0.15118756865897 A36 -H41 0.147464325328307 P26 -T48 0.147413159822421 Q24 -R30 0.146125904606239 L33 -G43 0.139235883906859 E23 -S44 0.13699017535972 D45 -V54 0.132303405060842 H41 -L53 0.130732941678016 Q24 -R52 0.125489443194612 A35 -S55 0.124551656957361 K40 -V54 0.124354673673423 Q24 -N46 0.124155414990107 A36 -G43 0.120302556958253 R30 -V54 0.120222090251254 Q32 -L58 0.114678052139353 A35 -R57 0.113381327269947 L33 -S55 0.112738332067929 G49 -V54 0.106073942618022 R30 -A42 0.105543860031398 A36 -R57 0.104752383288521 K39 -S55 0.101826752779067 E23 -G49 0.0974936265137152 A42 -V54 0.0964180101174144 A36 -F56 0.0947815554015579 Q32 -R57 0.083641174901659 L29 -V54 0.0814434450660926 A35 -L58 0.0811908761090958 A35 -S44 0.0806225061347563 Q32 -V54 0.0778175034849302 L25 -N46 0.0751387312177485 E23 -D45 0.0749677438372331 Q32 -F56 0.0738205651222481 L29 -G43 0.0729000300613762 A36 -A42 0.070853684581258 Q32 -L37 0.0670208468882896 D45 -R52 0.0669693372722053 Q32 -D45 0.0663212475302981 K39 -F56 0.0660052000863705 R27 -T48 0.0651420952927492 E34 -H41 0.0646089938377914 A42 -A47 0.0629664121709814 R30 -L53 0.0594575428485862 Q24 -L29 0.0574866527112983 A31 -N46 0.0524840091829654 D45 -F56 0.0474082141701961 A31 -L53 0.0446937723399743 A36 -I59 0.0435286607916376 L29 -S44 0.0414730587700092 A42 -I59 0.0412948038796053 A35 -H41 0.039950493424648 L37 -F56 0.0386663356349146 Q32 -H41 0.0380167292661719 G38 -S55 0.0357330055285541 G38 -F56 0.0335544560057039 L29 -A47 0.0329242714159358 A35 -F56 0.0322379193151496 A31 -H41 0.0320352330009861 A31 -V54 0.0287754674481522 Q32 -S55 0.0268504672162777 E34 -L58 0.0254846752389217 H41 -V54 0.0232748274297077 H41 -R52 0.0217805642004271 G38 -G43 0.0186998574323318 L25 -D45 0.0185272473739557 N46 -S55 0.0183095371862887 E23 -T48 0.0168358995950779 L29 -N46 0.0160705449214991 S44 -R57 0.0159867806519083 G43 -V54 0.0135959599862199 G38 -R60 0.00967237847730049 A35 -G43 0.00909294609907274 A36 -L58 0.00713664497061561 K28 -G43 0.00647680202965439 S44 -F56 0.00343186369195769 Q24 -G49 0.000953337077532534 G43 -R52 0.00050746645332933 G43 -L53 -0.0033997353099231 K28 -S44 -0.00554492108059002 S44 -G49 -0.00656252070588481 T48 -V54 -0.00781773729741686 R27 -D45 -0.0119858690152577 Q32 -N46 -0.0142567398969273 L33 -V54 -0.0149065428122102 Q24 -S44 -0.0157058077749832 Q32 -G38 -0.0186637292801617 E34 -S55 -0.0206985853565479 Q24 -A47 -0.0217865799817001 L25 -R30 -0.0222195239186798 N46 -V54 -0.0224428071307088 L33 -G38 -0.0235902064652294 N46 -F56 -0.0254263692972501 A42 -F56 -0.0257508869233791 G43 -R57 -0.0309292223941846 E34 -S44 -0.0349926306668058 L25 -G49 -0.0366331696197026 S44 -R52 -0.0390643761863121 A31 -L58 -0.0411809520342423 G43 -P50 -0.0439384655689246 S55 -R60 -0.0448370060000518 L33 -R57 -0.045398747450851 Q32 -A42 -0.0461581267991112 R27 -S44 -0.050262143164011 Q24 -D45 -0.0538104614096124 L37 -R60 -0.0578541770944552 R30 -S55 -0.0617863404503183 G38 -R57 -0.0682451842462841 G43 -R51 -0.0686151489011104 D45 -S55 -0.0688133832125407 S44 -L58 -0.0699686425643282 L25 -R52 -0.0701536494322939 L37 -A42 -0.0724129258690107 K40 -L53 -0.0756814453509773 A35 -I59 -0.0760265376518685 S44 -R51 -0.0765281924853279 L33 -I59 -0.0797933372287574 E34 -F56 -0.0821463254427535 E23 -R30 -0.0826077074755567 K40 -S55 -0.0834815718154149 R30 -A47 -0.0855878884956254 L33 -D45 -0.0856237622436886 Q24 -L53 -0.0862709542383526 A31 -S55 -0.0878223408375245 E23 -L29 -0.090258379689645 R30 -G43 -0.0904986768756901 P50 -S55 -0.091716502364215 A42 -R52 -0.0922659663834731 K28 -V54 -0.0943324610873137 P26 -R52 -0.0981410817926114 L25 -S44 -0.101212331353954 L29 -S55 -0.104771582598509 K39 -R60 -0.106585610637606 G43 -I59 -0.11302769901626 G43 -L58 -0.114510516073207 E34 -K39 -0.117536707239878 E34 -R57 -0.117907481728696 K40 -R60 -0.123303466813967 R30 -F56 -0.12346085525181 A42 -R60 -0.127669070432853 P26 -A47 -0.133858894651923 K28 -A47 -0.1440917369997 Q24 -T48 -0.145878101302142 L37 -R57 -0.149397866488251 L37 -I59 -0.152261872821798 D45 -R51 -0.153191598550622 L37 -L58 -0.156672092590856 A42 -L58 -0.159120986409674 L29 -L53 -0.163555522931065 Q32 -S44 -0.164865420663343 L33 -K39 -0.174574329309222 K28 -D45 -0.176657460317881 K39 -R57 -0.179000989923349 N46 -R51 -0.17979904713493 L33 -F56 -0.179816059929757 L33 -L58 -0.188143699315599 L33 -K40 -0.190383981313532 A31 -R57 -0.191226503269024 H41 -I59 -0.193793491551566 G38 -L58 -0.197005336358718 R30 -N46 -0.197739347277468 G38 -I59 -0.2039026063597 A31 -D45 -0.209489861906731 R30 -D45 -0.211016941917806 A42 -L53 -0.218019580455758 K28 -R52 -0.222660887227197 E23 -K28 -0.223170966670976 A35 -A42 -0.22509810277571 T48 -L53 -0.225861878218108 K28 -L53 -0.229016617178766 Q32 -K40 -0.230911558661605 E34 -A42 -0.234511378993184 H41 -R60 -0.249317295308287 A31 -A42 -0.249359292888481 K40 -R57 -0.249805857998795 Q32 -K39 -0.250950482292413 A35 -K40 -0.252648782710348 R27 -N46 -0.263175001432426 L33 -S44 -0.273273667032651 L25 -T48 -0.274929500704675 L33 -H41 -0.277706070717209 E23 -N46 -0.294612889571529 E23 -A47 -0.29605885201955 L25 -A47 -0.296106288277544 L29 -D45 -0.296140967548236 A47 -V54 -0.313815051034067 A42 -R57 -0.319149002935129 A47 -R52 -0.33831766370956 K39 -I59 -0.341693743092759 D45 -P50 -0.356194913846779 H41 -S55 -0.358708953129319 E23 -P50 -0.373764442813591 K40 -L58 -0.374400733332414 A42 -S55 -0.452209786564927 G43 -S55 -0.667231917833109