[Mon Aug 29 17:31:57 2016] >Input file: TMB2RVQ1M1G.pdb >TM segments: 44-67_ 152-159_ 169-174 MAIDEN score = 0.2878 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- G45 -F50 0.614698026841987 E44 -D49 0.611237635967289 M55 -D60 0.302255775868117 G45 -G52 0.246290034330164 D60 -M156 0.244964720647057 V59 -M156 0.204322632344661 G45 -I51 0.202446601277412 G46 -I51 0.199843699860101 Y48 -E53 0.183733863027507 M55 -S159 0.176801164339982 G46 -G52 0.14656347283934 E44 -E53 0.120372202037753 L155 -L172 0.111893080515524 E44 -G52 0.110405749732682 V152 -S174 0.104526272773682 A57 -S159 0.103809766030427 V59 -L158 0.101375828383239 L153 -L172 0.101080746002259 G45 -E53 0.10023489058058 A62 -S159 0.0989240080779836 A62 -L158 0.0981642474713003 A62 -L67 0.0915193332876636 G52 -A57 0.0869052139763058 V61 -L153 0.0781557146976437 L154 -V170 0.07390857611442 A62 -L153 0.0656269414687152 E53 -D60 0.0539522584507885 F50 -M55 0.0477590834821738 L158 -F169 0.0473662260729784 A57 -L158 0.047059376619168 D60 -F157 0.0466695525036234 V61 -L158 0.0448160993863285 F157 -H171 0.0392503427663844 G52 -S58 0.0369057104095785 S58 -L158 0.035062432840661 D49 -F54 0.0300998473662082 E53 -V59 0.0235696018767471 V61 -M156 0.0212332058192413 E44 -F50 0.0188109661429188 V61 -L155 0.0166587484530272 D60 -L158 0.0157880065072136 L153 -F173 0.0129207318783706 A62 -F157 0.0122121042710894 S58 -S159 0.0116634890225504 L155 -F169 0.010805731181978 L153 -H171 0.00927101592473004 D60 -S159 0.00895369916615338 L153 -L158 0.00462467889887463 E53 -S58 -0.00010019216016155 G66 -L154 -0.00279073151173304 L154 -F173 -0.00710585221691051 L155 -F173 -0.00798991856780962 F50 -S58 -0.00874865554071547 E53 -S159 -0.00932863100481252 L67 -L153 -0.0162637325846902 F169 -S174 -0.0189307477057324 L154 -H171 -0.0199407226900803 L154 -S174 -0.0207357738574712 M156 -V170 -0.0209524170835763 A62 -V152 -0.0245427956677631 F157 -V170 -0.030243409213238 G66 -L153 -0.0339937349967796 V59 -F157 -0.034166589376234 G66 -V152 -0.0348842674331369 V152 -L172 -0.0444934609521548 D63 -V152 -0.0519156052800076 Y48 -L64 -0.0628060170294311 A62 -M156 -0.0632056735886845 D60 -I65 -0.0662025098834436 S58 -F157 -0.0730614510709595 G46 -E53 -0.0762110131603346 A62 -L155 -0.0820202190713459 V152 -F173 -0.0829057873880035 F54 -D60 -0.0853105420146507 M156 -L172 -0.0873776516387677 V59 -S159 -0.0885449727914991 V59 -L155 -0.088660690550741 I51 -S58 -0.0899495205371833 V61 -V152 -0.0969162898422764 V61 -L154 -0.100862213770693 I47 -L64 -0.104684437153588 V61 -G66 -0.104963704560536 F54 -V59 -0.105087500193296 L154 -F169 -0.107279893073 V152 -H171 -0.117681807753126 L154 -L172 -0.119898045738582 D63 -L153 -0.123835750957826 I51 -K56 -0.126192469243325 V61 -F157 -0.12715561924964 A62 -L154 -0.15435242049233 A57 -F157 -0.169534140253053 D60 -L155 -0.180454223168755 L153 -S174 -0.182293112964576 L155 -S174 -0.188986364841791 E44 -I51 -0.193798969711743 L155 -H171 -0.208885053606815 M156 -H171 -0.240575760283417 L155 -V170 -0.259960837469033 F157 -F169 -0.261407387259257 M156 -F169 -0.279534642713985