[Fri Aug 26 17:40:09 2016] >Input file: TMB3G3Z3M1D.pdb >TM segments: 132-156_ 169-197 MAIDEN score = -13.7823 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- I143 -Y180 0.871254462550092 T152 -L170 0.759437244727007 L147 -V153 0.726946558163356 F132 -I137 0.672502658416305 L170 -Y175 0.632243413133481 L170 -F177 0.516219535299592 I151 -L170 0.480042392453351 I150 -L171 0.45570214553053 L147 -Y180 0.424925539511459 T152 -S169 0.395464629590644 M179 -P184 0.361192398661775 P146 -P184 0.35818552574048 V153 -Y175 0.3560842356523 L187 -Y192 0.340627360429355 W139 -P146 0.328333493024061 I151 -L171 0.30856815875214 T152 -L171 0.303650288982387 T152 -T176 0.275401950535805 P140 -L147 0.249502121463076 Q138 -P184 0.248155163234522 L134 -W139 0.247969344104217 S169 -I174 0.239411449713165 F177 -I182 0.225014851211739 P140 -T185 0.219590399024574 P146 -Y181 0.211406756281753 P148 -Y181 0.209482413024295 P146 -S169 0.209097139092277 P148 -V153 0.195132769662491 F145 -V153 0.194184877201503 V173 -Y180 0.189948445068247 I188 -L193 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