[Mon Aug 29 17:42:47 2016] >Input file: TMB3HGV9M6G.pdb >TM segments: 433-459_ 543-548_ 550-558 MAIDEN score = 10.0061 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- L545 -Q555 10 L547 -A552 1.1138430093476 I544 -H558 1.00421602002901 L547 -E554 0.928439092545067 V546 -V553 0.793701494172402 D440 -E451 0.676739874909327 L547 -V553 0.652887112858203 D440 -T452 0.535216419971976 V435 -D440 0.520837184474216 T543 -H558 0.51734266994783 T436 -E443 0.44310894620479 T543 -Q555 0.442543665463462 T436 -E457 0.423034357790052 T436 -L455 0.385326780973668 L545 -A552 0.36900249347585 G438 -E444 0.343940836204298 E444 -Q454 0.324873558706262 R439 -L458 0.324858037560444 T436 -T452 0.316784659925649 E443 -L450 0.311958641051349 R439 -E451 0.28794122683992 L545 -V553 0.276265285349759 Q454 -A459 0.265436955704502 E443 -E451 0.257726218372776 S442 -Q448 0.254429336532841 N434 -E443 0.241913114367252 I544 -E554 0.239577154929666 T436 -A459 0.232579424764305 D440 -R445 0.215816498091701 T543 -T557 0.203427929710157 R439 -V453 0.198596647831194 V446 -E451 0.194962721610622 E443 -A456 0.19386138390738 R439 -A459 0.187321309574722 N434 -D440 0.186292914710422 L545 -G556 0.176756291558652 E444 -T452 0.175516234118852 T436 -E451 0.167093995902784 V546 -Q551 0.158248811954082 S442 -W447 0.15328885720737 G438 -Q454 0.146053486155536 R439 -Q448 0.14556530683172 A552 -H558 0.145122252886728 G438 -A459 0.14209756791244 T543 -A552 0.141943451870419 A449 -E457 0.135389460585662 D440 -A449 0.133850940063535 N434 -A456 0.132794047250475 N434 -T452 0.129396038163645 G438 -T452 0.127173713231128 I441 -A459 0.124285332571748 I441 -A456 0.119677161448979 L437 -E443 0.119241879186493 V435 -V453 0.115232308390918 S442 -A456 0.115200719135665 V546 -G556 0.113325805479117 S442 -L450 0.113079987788586 N434 -A459 0.11210796072548 T543 -E554 0.110389088090627 L547 -Q555 0.102818881422651 L437 -V453 0.102453470300251 S442 -A449 0.101922313095053 S442 -A459 0.100983690108528 L437 -Q448 0.100664052405905 E443 -E457 0.088405778264691 L437 -A459 0.0877808996972549 V435 -S442 0.0866977568780305 V446 -L455 0.0831361996805469 Q448 -A456 0.0825898472883997 R439 -L450 0.0809116132497407 A433 -S442 0.0807948437064385 D440 -W447 0.0778432738201644 A449 -A456 0.0773286683786569 R445 -L455 0.0771323105099954 T436 -A456 0.0765865237754113 G550 -Q555 0.0765382346930839 E451 -A456 0.07085247219262 A433 -I441 0.0703824350757447 I544 -G556 0.0699693637539607 T436 -V453 0.0674148644559078 I441 -L450 0.0650317717206428 R445 -T452 0.0607059548709482 Q448 -V453 0.0596895468576619 H548 -V553 0.0592766728082799 G438 -A456 0.0519024151081853 G438 -E451 0.0513931925930613 G438 -L458 0.0482570112044631 R439 -V446 0.041176451114632 G438 -V446 0.0396815175976346 I441 -Q454 0.038753951443089 T436 -Q448 0.0360862813257707 L545 -G550 0.0357158596833216 R445 -E451 0.032092631762437 Q551 -G556 0.0298819262057233 L437 -W447 0.0256567868881354 V446 -L458 0.0255471187654082 H548 -Q555 0.0246448012757369 V435 -T452 0.023974782646488 S442 -T452 0.0239131214916455 L450 -A459 0.0205295798398959 L545 -T557 0.0195289630949489 G438 -Q448 0.0172130974601794 E444 -E451 0.0147006482270537 I441 -V453 0.0134095358847066 R439 -E444 0.0124176538394853 E443 -V453 0.012331785538322 E451 -A459 0.0121666077575036 S442 -Q454 0.0114915510110709 R445 -Q454 0.00788028714578148 I441 -Q448 0.00764631583196795 S442 -E451 0.0073828216496491 V435 -L458 0.0062637562462724 L547 -G556 0.0051341121423456 V435 -A459 0.00327764023447696 E444 -V453 0.00190660407098564 L437 -L458 0.00042384869358969 N434 -S442 -0.000559618621177593 T436 -S442 -0.00104457423859206 V553 -H558 -0.00247390278724424 V446 -A456 -0.00338347051299337 L450 -E457 -0.00425662059519549 R439 -A449 -0.00511725418235365 E443 -T452 -0.0052752701113925 I441 -L458 -0.00571431107001263 V435 -Q454 -0.00728738766470727 A552 -T557 -0.00778239122472169 V546 -Q555 -0.0078661499953065 L437 -Q454 -0.0085756231504952 N434 -L455 -0.00866534141963715 R439 -E457 -0.0104966947201552 E443 -L458 -0.0120196165346186 G438 -V453 -0.0231238800795897 I441 -E457 -0.0252478973193453 A449 -Q454 -0.0260807032588644 Q448 -E457 -0.0289468979374192 T436 -A449 -0.0307700673276832 D440 -E457 -0.0337741460637138 A433 -E444 -0.0395220395591687 T543 -V553 -0.040907245850208 R439 -L455 -0.0424774432030581 R439 -R445 -0.043627788642933 G438 -E457 -0.0524405854696122 I441 -W447 -0.0528070507773268 T436 -E444 -0.0592232644976507 R439 -T452 -0.0619771923210708 D440 -Q448 -0.062145278268755 E444 -L455 -0.0624030186937379 I544 -Q555 -0.0638875059271289 I544 -V553 -0.0658317520091796 I544 -T557 -0.067075193460151 V435 -A456 -0.0721100664636323 R439 -A456 -0.0724685719458931 V435 -E457 -0.07320070598794 E443 -A459 -0.0745471306704166 S442 -L458 -0.0787880941569585 I441 -L455 -0.0799817092857644 R439 -Q454 -0.0817542485576515 L437 -V446 -0.0822295755467612 L437 -E457 -0.0847118203965442 L437 -A456 -0.0850842009612505 H548 -E554 -0.0855773978384562 D440 -A459 -0.0885687728020192 A433 -E443 -0.0907537525863307 W447 -Q454 -0.0912496620278522 V435 -E443 -0.0926325496805136 E444 -A449 -0.0931945571502109 G438 -R445 -0.0957100087109977 S442 -V453 -0.095966360090737 A433 -L455 -0.0978639064338731 W447 -A456 -0.0985632357346624 T436 -L450 -0.099094435573005 A433 -R439 -0.0993160220048686 L547 -T557 -0.102091374022323 V546 -E554 -0.106156748429541 L437 -L450 -0.107860826525046 V446 -E457 -0.11231383534187 E451 -E457 -0.112522589343577 D440 -Q454 -0.115070709670632 L450 -L458 -0.115280645036876 N434 -L458 -0.115397394824451 I441 -E451 -0.11586656143162 G438 -E443 -0.117165975425782 W447 -E457 -0.121764927114412 I441 -T452 -0.121960433637115 E443 -L455 -0.123753375443507 R439 -W447 -0.125707993906597 D440 -A456 -0.126955022494137 D440 -L455 -0.12838595720969 I544 -Q551 -0.130126683377713 S442 -L455 -0.136170750723216 L437 -A449 -0.143588253147025 T452 -A459 -0.144169876751381 I441 -A449 -0.150848320695747 T452 -E457 -0.161246595237066 A449 -L458 -0.162142428415907 L437 -R445 -0.163840027866847 V446 -T452 -0.164989231756041 W447 -L455 -0.166766467440245 I441 -V446 -0.173924894114609 V435 -E451 -0.182852972187373 D440 -L450 -0.188620058999589 R445 -L450 -0.195462284050924 E444 -L450 -0.199252801454562 V546 -T557 -0.207257366140229 R445 -V453 -0.207434349850999 L437 -E451 -0.208461566103416 L437 -E444 -0.209376915210246 E451 -L458 -0.21103496341302 V453 -A459 -0.211674021843494 T436 -I441 -0.214471830282005 I544 -A552 -0.214924620356718 W447 -V453 -0.21518823158737 T436 -Q454 -0.219057662886726 T436 -L458 -0.22062217602761 L437 -L455 -0.224771207567908 A433 -D440 -0.226955242118833 E443 -Q454 -0.232086854514606 G438 -L455 -0.23292635319131 L547 -H558 -0.236256402220191 W447 -T452 -0.238620610510623 E443 -A449 -0.242844186702205 L437 -T452 -0.265368921151838 Q448 -L455 -0.267526381133213 D440 -V453 -0.273309616159971 V446 -V453 -0.273337979444071 L545 -Q551 -0.275698561408358 E443 -Q448 -0.281918582423528 L450 -A456 -0.283127851296103 T543 -G556 -0.28454664873036 D440 -L458 -0.289234950397891 T452 -L458 -0.289256737561427 D440 -V446 -0.291326389844039 L545 -H558 -0.298772271325014 L450 -L455 -0.307719643701118 A449 -L455 -0.318944509233173 V546 -H558 -0.324122523223959 L437 -S442 -0.329281953989954 N434 -I441 -0.33030846224012 N434 -R439 -0.330999664234467 Q448 -Q454 -0.338128590114742 V446 -Q454 -0.346375381977965 V453 -L458 -0.350390871716506 V435 -L455 -0.378993770422549 V435 -I441 -0.411188791461651 V546 -A552 -0.472213065332666 A433 -G438 -0.473218860918878 L545 -E554 -0.544116229470873