[Mon Aug 29 17:46:37 2016] >Input file: TMB3R888M1G.pdb >TM segments: 17-35_ 149-160 MAIDEN score = -6.1437 Below is the ranking list of the residue pairs and their related pseudo-energy (the lower, the better). This includes inter-chain residue pairs. The maximum (least favorable) pairwise energy value has been set to 10. See the MAIDEN software article: Postic,G., Ghouzam,Y. and Gelly,J.C. (2015) Biochimie, 115, 155–161. ----------- ---------------- Calpha pair Empirical energy ----------- ---------------- M30 -F149 0.699606637574417 M30 -C150 0.413105858625542 R29 -G151 0.411833232275438 E22 -C150 0.380667581029184 D33 -F149 0.340791765777338 M30 -G151 0.325719695112844 S26 -A153 0.319806776883055 V18 -Y158 0.314933671169028 S26 -G151 0.310322113171385 I34 -F149 0.305283474271804 A32 -G151 0.276078366338145 S26 -F152 0.275630713958781 D33 -G151 0.271950472818368 L27 -G151 0.244311592076648 A21 -D28 0.193657611817076 D25 -A32 0.183730589057574 V18 -D25 0.18232900413355 R29 -C150 0.178279257316689 V23 -V154 0.168545426566976 D28 -G151 0.160464601593636 Q24 -F152 0.156364392759578 V18 -V23 0.153043986379633 L27 -T35 0.14976329600745 T35 -F149 0.13120297367305 A21 -R29 0.124814849530259 A20 -D25 0.123870286165868 F152 -R157 0.12370376597115 S19 -V159 0.122834360778257 Q24 -A32 0.120580415668491 A153 -V159 0.116604758578969 Q24 -R29 0.111278861228859 R29 -I34 0.106720708486357 S19 -A153 0.0960808120306238 D25 -F152 0.0949756935226764 A20 -V159 0.0893183327272369 D25 -M30 0.0839158019373176 A31 -C150 0.0829236260745772 S26 -T35 0.0813553300377159 D33 -F152 0.0691704106327364 D25 -G151 0.0661147118012178 A20 -F152 0.0659166411253527 V18 -R157 0.0647775171079297 V18 -L27 0.063127572072025 V23 -A153 0.0629030766823107 I17 -R157 0.0575131803437046 I17 -F160 0.0568078031689283 A153 -F160 0.054357029294394 D33 -C150 0.0513795731791369 I34 -G151 0.045854733823318 S19 -L27 0.0383506336751516 V23 -F160 0.0342770859119368 V18 -A153 0.0338507128449255 M30 -T35 0.0306829344602084 V18 -G151 0.0282562621158231 V18 -P155 0.0272300807362049 I17 -V159 0.0246964314117744 V23 -V159 0.0204214889095358 A20 -G151 0.0202443428967377 T35 -G151 0.0196998102220325 I17 -F152 0.0173366492295016 S19 -F152 0.0142795095848317 S19 -F160 0.0142581015297799 S19 -D28 0.012743488710885 A21 -G151 0.0127258672476995 I17 -A153 -0.00143668317021728 I17 -P155 -0.00703559055103486 V154 -F160 -0.00799744139594338 A20 -F160 -0.01112095109931 L27 -F149 -0.0114808695455517 M30 -A153 -0.0121233257724835 S26 -V154 -0.0149743588952624 S26 -I34 -0.0151905371018901 S19 -G151 -0.0177136010622041 A21 -F152 -0.0178190043120781 E22 -R29 -0.0184941504013729 Q24 -G151 -0.0213021970411216 F152 -V159 -0.0245546783444732 V23 -A31 -0.0288594819902046 Q24 -A31 -0.0289932866677898 D28 -C150 -0.0291773192722427 V23 -A32 -0.0315812546516216 S26 -D33 -0.0336633821955421 E22 -A31 -0.0395870364059552 T35 -C150 -0.0426986635565005 S19 -D25 -0.0467035216953799 D25 -I34 -0.0471716092393752 R29 -T35 -0.0498801163501212 A32 -C150 -0.0507718545797073 A21 -M30 -0.0509546696389584 V23 -D28 -0.0547224252743472 I17 -D25 -0.0578289207793872 L27 -A153 -0.0597555571581214 E22 -A153 -0.0643586948956758 L27 -A32 -0.0675847402960983 A20 -R29 -0.0717183641759913 A31 -G151 -0.0745564405906998 D28 -D33 -0.0762503752922208 A20 -D28 -0.0790164482934983 Q24 -D33 -0.0832043803216519 A153 -Y158 -0.0852149788487913 D25 -D33 -0.0855665864274116 D28 -F149 -0.0882273690286359 E22 -L27 -0.0883631911471028 A31 -F152 -0.0895599119862229 S19 -Q24 -0.0916148365892395 R29 -F152 -0.091953922634894 E22 -D28 -0.0933125655656464 I17 -S26 -0.101424923900097 I17 -Q24 -0.102087032551355 I17 -E22 -0.102217420046204 D25 -F149 -0.104769371242328 I17 -D156 -0.105386156086275 P155 -F160 -0.108411010048592 I34 -C150 -0.108469605107128 S19 -V154 -0.108556412566817 E22 -M30 -0.117151866816152 I17 -G151 -0.117606813026953 E22 -G151 -0.121263123657355 L27 -F152 -0.125414918685854 V23 -F149 -0.137450619299932 V154 -V159 -0.145223852129382 F149 -V154 -0.146765063322349 E22 -V154 -0.14920458256174 S19 -S26 -0.152066650977591 A32 -F149 -0.153024596985529 D28 -I34 -0.153854445325465 V18 -F160 -0.157144024828685 V23 -C150 -0.158922225090404 D25 -A153 -0.160380503079393 D28 -F152 -0.162621216029685 V23 -R29 -0.171930152993594 L27 -D33 -0.173829889186707 I17 -V23 -0.173918448278956 R29 -F149 -0.179892356455744 D25 -C150 -0.184438965690112 R29 -A153 -0.189844217662309 Q24 -C150 -0.192267972271915 S26 -F149 -0.192328221282964 D28 -T35 -0.199353932452992 F152 -F160 -0.213924782094166 I17 -Y158 -0.218456276485886 D25 -A31 -0.2218540931935 C150 -P155 -0.222311267893927 S26 -A32 -0.227743806393687 A20 -S26 -0.227761357251283 I17 -V154 -0.230826223425591 V23 -G151 -0.238926645567083 V18 -F152 -0.242985921731082 V18 -S26 -0.260757240019005 A31 -F149 -0.261601955815537 V23 -M30 -0.267455213532999 V23 -F152 -0.273109646730394 A20 -L27 -0.27594400582281 V18 -D156 -0.278663510664862 Q24 -M30 -0.30757791877252 A21 -L27 -0.315404408490446 M30 -F152 -0.321322572088023 V18 -V159 -0.349262859493435 V18 -V154 -0.353027789346759 S26 -A31 -0.37739930940892 L27 -I34 -0.38655789883103 V18 -Q24 -0.412509296415744 E22 -F152 -0.41450409775467 S26 -C150 -0.476239724057344 A21 -S26 -0.533491879809912 L27 -C150 -0.546145429170007